Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002938767.1 | Gene: | sema4g / 100038182 | XenbaseID: | XB-GENE-856594 | Length: | 830 | Species: | Xenopus tropicalis |
Alignment Length: | 818 | Identity: | 211/818 - (25%) |
---|---|---|---|
Similarity: | 349/818 - (42%) | Gaps: | 169/818 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 MILLITLSGLTIVAGWMP--------DVKPDLQTKQDKV--LAHFIGNSTDYFKILDHNDEFVL- 72
Fly 73 VGAKDVIYNVSLNGLKEIAR--LEWHSTDADRELCALKGK-HEWDCHNYLRVYALRPNGEVLLCG 134
Fly 135 TNSYKPRC-----RHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGH 194
Fly 195 LYSATVADFSGGDPL---IYRENLRTEQYDLKQLNQPDFVGA----------IERNGYVLFFFRE 246
Fly 247 LSMEVMN-FGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQAISPIV 310
Fly 311 ESGS--KSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRP 373
Fly 374 GQCVED---------SRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVK 429
Fly 430 SLSGAYYDVIYSGTDDGKVTKFINILS-THPNSTVDRLKTVVISEMQVLPLGTPIRELVISTSKN 493
Fly 494 SLVVVSDGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTYLQS--- 555
Fly 556 --LNSTKKAAALLCPHIPRDAPGAETVSFVTMAPPPTEEQKLLYSNVGSSQ----GNQPSLEQQP 614
Fly 615 TGGDDFGLNKITLTSMDPD-----DIMPNLNDPQKSTA--------SVDEIKYASTPS------- 659
Fly 660 ----------FMLLTTIVFFTFLVGGIAGICCVKAKSRLMEAQMDESHRNHFG------------ 702
Fly 703 -KPMQFKHQNTGKDINLLMGSNAYTTTQKTPNLDLEKD 739 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 148/490 (30%) |
PSI | 510..>537 | CDD:214655 | 10/26 (38%) | ||
sema4g | XP_002938767.1 | Sema | 47..499 | CDD:417757 | 148/492 (30%) |
PSI | 500..>527 | CDD:214655 | 11/28 (39%) | ||
Ig_Sema4B_like | 557..643 | CDD:409456 | 16/98 (16%) | ||
Ig strand B | 570..574 | CDD:409456 | 0/14 (0%) | ||
Ig strand C | 582..586 | CDD:409456 | 1/3 (33%) | ||
Ig strand E | 605..609 | CDD:409456 | 0/3 (0%) | ||
Ig strand F | 619..624 | CDD:409456 | 0/4 (0%) | ||
Ig strand G | 636..639 | CDD:409456 | 0/2 (0%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |