Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814281.1 | Gene: | sema4d / 100038178 | XenbaseID: | XB-GENE-492763 | Length: | 852 | Species: | Xenopus tropicalis |
Alignment Length: | 589 | Identity: | 180/589 - (30%) |
---|---|---|---|
Similarity: | 287/589 - (48%) | Gaps: | 78/589 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 NAIPMILLITLSGLTIVAGWMPDVKPDLQTKQDKVLAHFIGNSTDYFKILDHNDEFVL-VGAKDV 78
Fly 79 IYNV-SLNGLKEIARLEWHSTDADRELCALKGK-HEWDCHNYLRVYALRP-NGEVL-LCGTNSYK 139
Fly 140 PRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGHLYSATVADFS 204
Fly 205 GGDPLIYREN----LRTEQYDLKQLNQPDFVGA-IER---------NGYVLFFFRELSMEVMNFG 255
Fly 256 KAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQAISPIVES-GSKSLIY 319
Fly 320 AVFTTSVNAIPGSAVCAFNVDDILAAF-DGEF---KSQKDSQSHWLPVEREQVPKPRPGQCVED- 379
Fly 380 --------SRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYY 436
Fly 437 DVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPIRELVIST--SKNSLVVVS 499
Fly 500 DGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTYLQSLNSTKKAAA 564
Fly 565 LLCP 568 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 157/490 (32%) |
PSI | 510..>537 | CDD:214655 | 8/26 (31%) | ||
sema4d | XP_012814281.1 | Sema_4D | 30..500 | CDD:200520 | 157/502 (31%) |
PSI | 502..>529 | CDD:214655 | 8/26 (31%) | ||
Ig | 561..645 | CDD:386229 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |