Protein Alignment Sema1b and sema3bl

DIOPT Version :9

• Sequence 1: NP_001163178.1
• Gene: Sema1b / 37007
• FlyBaseID: FBgn0016059
• Length: 770
• Species: Drosophila melanogaster
• Sequence 2: NP_001116184.1
• Gene: sema3bl / 100004611
• ZFINID: ZDB-GENE-030131-2956
• Length: 771
• Species: Danio rerio
• Alignment Length: 634
• Identity: 195/634 - (30%)
• Similarity: 300/634 - (47%)
• Gaps: 102/634 - (16%)

  Fly    17 IPMILLIT----LSGLTIVAGWMPDV----KPDLQTKQDKVLAHFIGNSTDYFKILDHNDEFVLV 73
            :|:::|:.    ||..|.|.  :|.:    |..|.|.:..|.....|:.......||...:.:.:
Zfish     3 LPVLVLVALVLPLSSCTKVN--VPRLRLTHKDLLDTNRTSVFNGLHGDLHLSAVFLDEYHDRLFL 65

  Fly    74 GAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGKH-EWDCHNYLRVYALRP--NGEVLLCGT 135
            |.|||:|::.|:...:...:.|.|...:||.|.||||. |.:|.|::|:  |:|  ...:|.|||
Zfish    66 GGKDVLYSLRLDHTHDAKEIHWPSLPGNREDCILKGKDPEMECANFVRL--LQPFNRTHLLACGT 128

  Fly   136 NSYKPRCRHYTPVEVSSEEAGSAGH--AHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGHLYSA 198
            .:::|.|.:.           :.||  .|....:.:.....:|.||:.|.......|..|.||:.
Zfish   129 GAFQPVCAYV-----------NVGHRGEHVFSLDQTTVQNGRGRCPHDPKLPFASTFTGGELYTG 182

  Fly   199 TVADFSGGDPLI-----YRENLRTEQYDLKQLNQPDFVGA------IER-NGYVLFFFRELSMEV 251
            ..|||.|.|.:|     .|..:|||. |.:.|::|.||.|      .:| :..:.|||.|.:.|.
Zfish   183 LTADFLGRDSVISRGFGTRSPMRTET-DQRILHEPRFVAAHLIPDSADRDDDKIYFFFTERATET 246

  Fly   252 --MNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGE--FPFYFDEIQAISPI-VE 311
              .:...|:::|:.|:|.||.||.......|::|:||||.|||||.  ...:|.:::.:..: .:
Zfish   247 AERDDDGAIHTRIGRLCANDVGGQRVLVNKWSTFIKARLVCSVPGPHGIQTHFHQLEDVFLLRTK 311

  Fly   312 SGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQC 376
            ..:...|||:|:|..|...|.|||.:::.||..||:|.|..::.....|.|.| .:||.||||.|
Zfish   312 DETNPEIYAIFSTISNVFQGYAVCVYSMADIREAFNGPFAHKEGPDYQWGPYE-GRVPYPRPGVC 375

  Fly   377 -----VEDSRTLTS------IAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKS 430
                 .:..|...|      ..:.|.:.||||...|...|.:|||.:....:|||.|.| .:.::
Zfish   376 PSKITAQPGRAFRSTLEFPDTVLQFARTHPLMWRPVYPSHRQPLLLRTGAPYRLTHITV-DRTQA 439

  Fly   431 LSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPIRELVISTSKNSL 495
            ..| ||||::.|||.|.|.|.| :|. ..||...  :.:.:.||||..:.|||..:.||..:.:|
Zfish   440 EDG-YYDVMFIGTDIGTVLKVI-VLG-KGNSLAG--EEITLEEMQVFKVPTPITSMDISVKRQTL 499

  Fly   496 VVVSDGSLVSVPLHHCS-HIVDCLGCLSLQDPICAWDLQT------------------H-----E 536
            .|.|..::|.||||.|| :...|..|...:||.||||.||                  |     :
Zfish   500 FVGSQTAVVQVPLHRCSMYGKACAECCLARDPYCAWDGQTCTRYLPNTKRRYRRQDIKHANPAVQ 564

  Fly   537 C--KNLAT-----SQHK--FGTK---TYLQSLNSTKKAAALLCPHIPRD 573
            |  :||:.     |:.:  :||:   |:|:.:..:.:|....  ||.||
Zfish   565 CMDQNLSVEDVDLSEERVVYGTENNSTFLECVPRSPQATVTW--HIQRD 611

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sema1b	NP_001163178.1	Sema_1A	55..511	CDD:200498	158/488 (32%)
		PSI	510..>537	CDD:214655	13/50 (26%)
sema3bl	NP_001116184.1	Sema_3G	42..515	CDD:200516	158/493 (32%)
		PSI	514..>550	CDD:214655	12/35 (34%)
		Ig_Semaphorin_classIII	579..664	CDD:143279	9/35 (26%)
		IG_like	581..663	CDD:214653	9/33 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3611
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11036
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.910