DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3c and Eif3c

DIOPT Version :10

Sequence 1:NP_611242.1 Gene:eIF3c / 37005 FlyBaseID:FBgn0034258 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_666312.1 Gene:Eif3c / 56347 MGIID:1926966 Length:911 Species:Mus musculus


Alignment Length:937 Identity:477/937 - (50%)
Similarity:634/937 - (67%) Gaps:65/937 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRFFANGSESESESS---EEEIQ---ATNFNKASAFQFSDDEEEVKRVVRSTKEKRYENLTSII 59
            |||||..||:||||||   ||.:.   :.|:.| .....|:|||:.||||||.|:||:|.||::|
Mouse     1 MSRFFTTGSDSESESSLSGEELVTKPVSGNYGK-QPLLLSEDEEDTKRVVRSAKDKRFEELTNLI 64

  Fly    60 KTIRNHKKIKDIPNTLSSFEDLTRAYQKALPVISKEENGITPRFYIRCLAELEDFINEVWEDREG 124
            :||||..||:|:...|..||.|.:||.||..::.||  |: ||||||.||:|||::||:|||:||
Mouse    65 RTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYLNELWEDKEG 126

  Fly   125 RKNLSKNNSKSLGTLRQKVRKYIKDFEDDLSRFREAPDQESEAEDEVVALESDGGDAGDDSDAGV 189
            :|.::|||:|:|.|||||:|||.:|||..::.:::.|:|.::.:.|....:|:|....|:.:.||
Mouse   127 KKKMNKNNAKALSTLRQKIRKYNRDFESHITNYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGV 191

  Fly   190 KPTEAVPKAVKSAPA-----KAAPADDDDSDDSID--WD-SDSESETESSDDENQYQNMRERFLK 246
            ..|..:.|..:|:..     |....||:||:||.|  || |.:.|:::|.::|.:...:..:|||
Mouse   192 GNTTFLKKKQESSGESRKFHKKMEDDDEDSEDSEDEEWDTSSTSSDSDSEEEEGKQTVLASKFLK 256

  Fly   247 R--TTEK-----EEKDDDKRKDKRKEQKTKIRKRAEDDEDGEWETVVKG--HVVEKPKMFEKDAE 302
            :  |||:     |:|.:||.|.|...:..::.:..||:|.||||.|..|  .|.||||||.|..|
Mouse   257 KAPTTEEDKKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTE 321

  Fly   303 IDVPLVLAKLLEIMSARGKKRTDRRLQIDLLFELRDISDQHNLGTAVSVKIHFNIISAIYDYNQK 367
            |...:|:.||.||:..||||.|||..||:||..|..|:.::|||..|.|||.||||:::||||..
Mouse   322 ITHAVVIKKLNEILQVRGKKGTDRATQIELLQLLVQIAAENNLGVGVIVKIKFNIIASLYDYNPN 386

  Fly   368 ISEPMKLEHWALLLEVMQSMMKLLLANADIIMSESVAEEHEEYAT--SPFYVRGCPLAAVERLDD 430
            ::..||.|.|.:.|:.:..:|..|:|:::|.:.|::.||.|....  .|..||||.|..|||:|:
Mouse   387 LATYMKPEMWQMCLDCINELMDTLVAHSNIFVGENILEESENLHNFDQPLRVRGCILTLVERMDE 451

  Fly   431 EFVKLLKECDPHSNDYVSRLKDEVNVVKTIELVLQYFERSGTNNERCRIYLRKIEHLYYKFD--- 492
            ||.|:::..||||.:||..||||..|...||.|.:|.|..||..|.|:||||:|.|.|||||   
Mouse   452 EFTKIMQNTDPHSQEYVEHLKDEAQVCAIIERVQRYLEEKGTTEEICQIYLRRILHTYYKFDYKA 516

  Fly   493 -------PE-VLKKKRGELPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWF 549
                   || ..|.::.:.......|..:|::|||:|||||.||||||.|||.||||||:|..|:
Mouse   517 HQRQLTPPEGSSKSEQDQAENEGEDSAVLMERLCKYIYAKDRTDRIRTCAILCHIYHHALHSRWY 581

  Fly   550 QARDLVLMSHLQDNIDAADPATRILYNRMMANLGLCAFRQGNVKDAHHCLVDLMVTGKPKELLAQ 614
            |||||:|||||||||..|||..:|||||.|..||:||||||..||||:.|:|:..:|:.||||.|
Mouse   582 QARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGLTKDAHNALLDIQSSGRAKELLGQ 646

  Fly   615 GLLPQRQHERSAEQEKIEKQRQMPFHMHINLELLECVYLVSAMLLEIPYIAAHEFDARRRMISKT 679
            |||.:...||:.||||:|::||:|||:||||||||||||||||||||||:||||.|||||||||.
Mouse   647 GLLLRSLQERNQEQEKVERRRQVPFHLHINLELLECVYLVSAMLLEIPYMAAHESDARRRMISKQ 711

  Fly   680 FYQQLRSSERQSLVGPPESMREHVVAAAKAMRCGNWQACANFIVNKKMNTKVWDLFYESDRVREM 744
            |:.|||..|||.|:|||||||||||||:|||:.|:|:.|.:||:|:|||.||||||.|:|:||.|
Mouse   712 FHHQLRVGERQPLLGPPESMREHVVAASKAMKMGDWKTCHSFIINEKMNGKVWDLFPEADKVRTM 776

  Fly   745 LTKFIKEESLRTYLFTYSNVYTSISIPSLAQMYELPVPKVHSIISKMIINEELMASLDDPSETVG 809
            |.:.|:||||||||||||:||.|||:.:|:.|:||.:|.|||||||||||||||||||.|::||.
Mouse   777 LVRKIQEESLRTYLFTYSSVYDSISMETLSDMFELDLPTVHSIISKMIINEELMASLDQPTQTVV 841

  Fly   810 MHRSEPSRLQALAMQFVDKVTNLVDVNEKVFDMKQGNFFQRGNMGNRGDRGYNRNQNNQGGNWLG 874
            |||:||:..|.||:|..:|:.:||:.||:|||.|||.:                     ||.:  
Mouse   842 MHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY---------------------GGYF-- 883

  Fly   875 QRRDRNNRNRNQRGHHKNNQDRQQQQQ 901
              ||:.:..|...|:.:....||||.|
Mouse   884 --RDQKDGYRKNEGYMRRGGYRQQQSQ 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3cNP_611242.1 eIF-3c_N 24..671 CDD:428482 332/676 (49%)
PINT 744..823 CDD:214509 54/78 (69%)
Eif3cNP_666312.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 20/43 (47%)
eIF-3c_N 29..703 CDD:428482 332/677 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..299 41/141 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..540 3/19 (16%)
PINT 776..864 CDD:214509 57/87 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 883..911 9/30 (30%)

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