DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3c and eIF3c

DIOPT Version :10

Sequence 1:NP_611242.1 Gene:eIF3c / 37005 FlyBaseID:FBgn0034258 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_318103.3 Gene:eIF3c / 1278503 VectorBaseID:AGAMI1_005214 Length:955 Species:Anopheles gambiae


Alignment Length:933 Identity:606/933 - (64%)
Similarity:737/933 - (78%) Gaps:42/933 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRFFANGSESESESSEEEIQATNFNKASAFQFSDDEEEVKRVVRSTKEKRYENLTSIIKTIRNH 65
            ||||||.||:|:|:||.:. :.....:.:.|.|||:||:|||||||.||||||:|::|||:||||
Mosquito     1 MSRFFAGGSDSDSDSSSDS-EPVIRQQVAQFTFSDEEEDVKRVVRSKKEKRYEDLSNIIKSIRNH 64

  Fly    66 KKIKDIPNTLSSFEDLTRAYQKALPVISKEENGITPRFYIRCLAELEDFINEVWEDREGRKNLSK 130
            |||||:.:.|:|||:..|||.|||||:.|||||:|||..:|.|||||||:||.|:|:|.||||||
Mosquito    65 KKIKDMSSVLTSFEEFMRAYTKALPVVMKEENGVTPRIVVRALAELEDFVNESWDDKESRKNLSK 129

  Fly   131 NNSKSLGTLRQKVRKYIKDFEDDLSRFREAPDQESEAEDEVVALESDGGDAGDDSDAGVKPTEAV 195
            ||:|:|||||||.||||||||.|:.|||.||:..:|.|::    :....:.|.|.:......:..
Mosquito   130 NNNKALGTLRQKFRKYIKDFESDMKRFRAAPEDFAEEEED----DEREDEKGSDEEEEKVVVQVE 190

  Fly   196 PKAV--KSAPAKAAPADDDDSDDSIDWDSDSESETESSDDENQYQNMRERFLKRTTEKEEK---- 254
            ||||  |..|.||.|.......||.||.|||:|::.|||::.:|.::|:||||:..:..|:    
Mosquito   191 PKAVSFKKEPEKAKPVKPVADSDSSDWGSDSDSDSTSSDEDAKYTSIRDRFLKKPEKGTEEIASA 255

  Fly   255 ------DDDKRKDKRKEQKTKIRKRA-----------EDDEDGEWETV--VKGHVVEKPKMFEKD 300
                  ||..:|:|:|:....:.|:.           |::|:| |:.|  .:....|:||||.||
Mosquito   256 PSGVSGDDAFKKEKKKKTGEALSKKKKPKQDEMFDENEEEEEG-WKVVNGTRSGASEQPKMFAKD 319

  Fly   301 AEIDVPLVLAKLLEIMSARGKKRTDRRLQIDLLFELRDISDQHNLGTAVSVKIHFNIISAIYDYN 365
            ||||..||:.||.|:|:|||||||||::||:.|.|||.:::.:|||.||:|||.|||:|||:|||
Mosquito   320 AEIDTKLVVNKLNEVMAARGKKRTDRKMQIEFLRELRTVAETNNLGPAVAVKIRFNIVSAIFDYN 384

  Fly   366 QKISEPMKLEHWALLLEVMQSMMKLLLANADIIMSESVAEEHEEYATSPFYVRGCPLAAVERLDD 430
            .|:|..||||||:.|||.:|.::|||||:.|:.:|||:.:|:|||.|:||.:|||.|.|||||||
Mosquito   385 PKVSGAMKLEHWSKLLEEIQELLKLLLAHEDVHLSESILDEYEEYDTAPFKIRGCMLTAVERLDD 449

  Fly   431 EFVKLLKECDPHSNDYVSRLKDEVNVVKTIELVLQYFERSGTNNERCRIYLRKIEHLYYKFDPEV 495
            ||.|||||||||||:||.||||||.|...||.|:.|.||.|...|.||||||||:||||||||:|
Mosquito   450 EFTKLLKECDPHSNEYVDRLKDEVPVTNIIEQVVTYVERLGNEMEICRIYLRKIDHLYYKFDPDV 514

  Fly   496 LKKKRGELPATTSTSVDVMDKLCKFIYAKDDTDRIRTRAILAHIYHHAMHDNWFQARDLVLMSHL 560
            |||::|:|||.|.|||:.|||||::|||||.|||:||||||:||:|||:||||||||||||||||
Mosquito   515 LKKRKGQLPANTITSVEEMDKLCRYIYAKDQTDRLRTRAILSHIFHHALHDNWFQARDLVLMSHL 579

  Fly   561 QDNIDAADPATRILYNRMMANLGLCAFRQGNVKDAHHCLVDLMVTGKPKELLAQGLLPQRQHERS 625
            |:.|..:||||:||||||||||||||||.||:||||.||||||:||||||||||||:||||||||
Mosquito   580 QETIHHSDPATQILYNRMMANLGLCAFRHGNIKDAHLCLVDLMMTGKPKELLAQGLVPQRQHERS 644

  Fly   626 AEQEKIEKQRQMPFHMHINLELLECVYLVSAMLLEIPYIAAHEFDARRRMISKTFYQQLRSSERQ 690
            .|||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||
Mosquito   645 LEQEKIEKQRQMPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKTFYQQLRSSERQ 709

  Fly   691 SLVGPPESMREHVVAAAKAMRCGNWQACANFIVNKKMNTKVWDLFYESDRVREMLTKFIKEESLR 755
            |||||||||||||||||||||.|:|.||||||||||||.||||||||::|||||:.|||||||||
Mosquito   710 SLVGPPESMREHVVAAAKAMRHGDWNACANFIVNKKMNVKVWDLFYEANRVREMMIKFIKEESLR 774

  Fly   756 TYLFTYSNVYTSISIPSLAQMYELPVPKVHSIISKMIINEELMASLDDPSETVGMHRSEPSRLQA 820
            |||||||||:.|||:|.||.|::||..||||:|||||||||||||||||:||:.|||||||||||
Mosquito   775 TYLFTYSNVFASISVPHLADMFKLPKSKVHSLISKMIINEELMASLDDPTETIVMHRSEPSRLQA 839

  Fly   821 LAMQFVDKVTNLVDVNEKVFDMKQGNFFQRGNMGNRGDRGYNRN-QN----NQGGNWLGQRRDRN 880
            |:||..||||||||.||::|:||||||||||     |::||||: ||    ||..||...|| ::
Mosquito   840 LSMQLADKVTNLVDANERIFEMKQGNFFQRG-----GNQGYNRDRQNYRNQNQNQNWNNNRR-QD 898

  Fly   881 NRNRNQRGHHKNNQDRQQQQQQQ 903
            ||||..||:....:.|:|::..:
Mosquito   899 NRNRGNRGNQNRGEGREQREHHR 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3cNP_611242.1 eIF-3c_N 24..671 CDD:428482 419/671 (62%)
PINT 744..823 CDD:214509 63/78 (81%)
eIF3cXP_318103.3 eIF-3c_N 30..690 CDD:428482 438/684 (64%)
PINT 765..851 CDD:214509 65/85 (76%)

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