DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and galr2b

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001410737.1 Gene:galr2b / 798737 ZFINID:ZDB-GENE-131121-48 Length:378 Species:Danio rerio


Alignment Length:321 Identity:108/321 - (33%)
Similarity:173/321 - (53%) Gaps:24/321 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQM-RNVPNTYILSLALADLLVIITTVPLA 138
            |...|.:.||.::|:|||::|.:||..::.|.|...|: .|..|.:||:|::||...||..||..
Zfish    20 YQLNPASVIVSVVFSLIFLLGTIGNSLVLAVLLRSGQVGYNTTNLFILNLSVADFFFIIFCVPFQ 84

  Fly   139 STVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMT 203
            :|:|::|.|.:|||:|.:..|..::::..|.|||.|:|.|||.||..|||....     |.....
Zfish    85 ATIYSLEGWVFGSFMCKVVHFFINLTMYASSFTLAAVSVDRYLAIRYPLRSREL-----RTPCNA 144

  Fly   204 LATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPL 268
            :...|.||.|:::...|.|...:|    |:.::..:|.|   .|..:..|.:....|:..|.||:
Zfish   145 VVAMVVIWGLSLVFAGPYLSYYDL----IDFENSNVCVP---GWEEHNRKVLDTCTFVFGYVIPV 202

  Fly   269 VVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFLWFYF- 332
            :::::.|.. .:..:::|..|  :.|.....||:|||...::...|:|.||:|||||..|.:.: 
Zfish   203 LIVSLSYTR-TIKYLWTAVDP--LDGMSESKRAKRKVTKMIIIVTVLFCICWLPYHVVILCYLYG 264

  Fly   333 -WPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC-RGASGRRK 391
             :|..|..| ||    |::::||::||||.||:....||..|||.|.:...| ....||.|
Zfish   265 DFPFNQTTY-AF----RLLSHCMAYANSCLNPIVYALVSKHFRKGFKKVFSCILSKKGRNK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 101/297 (34%)
TM helix 1 83..109 CDD:320593 11/25 (44%)
TM helix 2 116..142 CDD:320593 11/25 (44%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 4/19 (21%)
TM helix 5 252..277 CDD:320593 6/24 (25%)
TM helix 6 300..330 CDD:320593 15/29 (52%)
TM helix 7 345..370 CDD:320593 9/24 (38%)
galr2bNP_001410737.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 101/297 (34%)
TM helix 1 28..54 CDD:320225 11/25 (44%)
TM helix 2 62..88 CDD:320225 11/25 (44%)
TM helix 3 100..130 CDD:320225 12/29 (41%)
TM helix 4 142..162 CDD:320225 4/19 (21%)
TM helix 5 186..215 CDD:320225 6/29 (21%)
TM helix 6 231..261 CDD:320225 15/29 (52%)
TM helix 7 273..298 CDD:320225 12/29 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..362
Blue background indicates that the domain is not in the aligned region.

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