DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and gpr37l1

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001072523.1 Gene:gpr37l1 / 779978 XenbaseID:XB-GENE-982680 Length:451 Species:Xenopus tropicalis


Alignment Length:439 Identity:86/439 - (19%)
Similarity:162/439 - (36%) Gaps:114/439 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PTALPPMPNVTETLWDLAMVVSQSTQW-PLLDTGSSENFSELVTTETPYVPYGRRP-ETYIVPIL 87
            |..:.|.|:.|..|..:....:.::.| |.|              :.|..|.|... ..|.|.:|
 Frog    69 PRLIHPPPSGTPLLNQILNDTALTSTWHPQL--------------QNPLYPLGESSLSAYGVLLL 119

  Fly    88 FALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEYWPYGSF 152
            ..::|.||::||.:::.:......:::..::.:..|||.|.:::...:|:............|..
 Frog   120 SLVVFAVGIIGNLSVMCIVWHSLYLKSAWDSILAGLALWDFMLLFFCLPVVVFQEITRRRLLGVV 184

  Fly   153 LCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATR--MTLATAVSIWLLAI 215
            .|.:..:|:..|:|||.|:|.||..||:.:|..|      ....|...|  ..|.....|||.::
 Frog   185 SCRVVPYMEVTSLGVSTFSLCALGIDRFQSITSP------QMSPRPVERCQSILGKLAVIWLGSL 243

  Fly   216 LCGLPALI----------GSNL----------KHLGINEKSIVICYPYPEEWGINYAKSMVLLHF 260
            :..||.::          ||.:          .:|.....|:|:.|.:...|           .|
 Frog   244 ILALPEILLWQFTQEQSPGSGMVIDTCVMLPAPNLPPVLHSLVLTYQHARMW-----------WF 297

  Fly   261 L-VYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYH 324
            | .|:.:|| :..:..:|:.|.::.::.       .::..:.:|:::..|.:...::|:|.||.:
 Frog   298 LGCYFCLPL-LFTITSLLVTLRIVGTSK-------DIKYGQCQRQLSWIVASLATVYGVCTLPEN 354

  Fly   325 V--FFLWFYFWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGAS 387
            |  ..:.:......:|       :|.::.....|......||.|..:|                 
 Frog   355 VTNVIITYTNLDVPKD-------LLSLITQFFLFLKCAVTPVLLLCLS----------------- 395

  Fly   388 GRRKKRGQH--DTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCRLQET 434
               |:.||.  |..|                   .|.:..|||...|:|
 Frog   396 ---KQLGQAFLDCCC-------------------CCCEEAIRSDSKQQT 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 64/319 (20%)
TM helix 1 83..109 CDD:320593 7/25 (28%)
TM helix 2 116..142 CDD:320593 5/25 (20%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 6/21 (29%)
TM helix 5 252..277 CDD:320593 5/25 (20%)
TM helix 6 300..330 CDD:320593 7/31 (23%)
TM helix 7 345..370 CDD:320593 5/24 (21%)
gpr37l1NP_001072523.1 7tm_GPCRs 114..402 CDD:475119 67/339 (20%)
TM helix 1 116..140 CDD:320254 7/23 (30%)
TM helix 2 149..171 CDD:320254 5/21 (24%)
TM helix 3 187..209 CDD:320254 9/21 (43%)
TM helix 4 233..249 CDD:320254 4/15 (27%)
TM helix 5 291..314 CDD:320254 6/34 (18%)
TM helix 6 336..358 CDD:320254 6/21 (29%)
TM helix 7 370..395 CDD:320254 6/31 (19%)

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