DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and gpr83.2

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001072505.1 Gene:gpr83.2 / 779960 XenbaseID:XB-GENE-993677 Length:420 Species:Xenopus tropicalis


Alignment Length:417 Identity:101/417 - (24%)
Similarity:188/417 - (45%) Gaps:68/417 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 DTGSSENFSELVTTETPYVPYGRRPET-YIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNT 118
            |.|..||       :|.|....:.... .::.:.:::|.|:.:.||..:..|.:...:|::..:.
 Frog    49 DIGDFEN-------DTKYEAESQSSTVKALLIVAYSVIIVISLFGNILVCHVVIKNSRMQSATSL 106

  Fly   119 YILSLALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAI 183
            :|::||:||:::.:...|.....:....|.:|..:|.:|.|::..|:.|||.||.|::.||:..|
 Frog   107 FIVNLAVADIMITLLNTPFTLVRFVSSTWVFGKLMCHVSRFVQYCSVHVSVLTLMAIALDRHQVI 171

  Fly   184 VDPLRKFHAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVIC---YPYPE 245
            :.||:.       |.:|...:...:.||.:|....||..:...|:...|.....::|   :|||.
 Frog   172 MHPLKP-------RMSTVKGIICIIVIWFMASGFSLPHAVYQKLEQFFIGNTVRMVCLPSFPYPA 229

  Fly   246 E--WGINYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRA-RRKVAV 307
            :  |     |.:.|..|::.|.:||:||::.|..:|..|....:: |:|  .:.|..| |||..:
 Frog   230 DLFW-----KYLDLATFVLLYVLPLIVISITYTTVAKKLWLRNAI-GDI--TMEQYYAHRRKKKM 286

  Fly   308 T---VLAFVVIFGICFLPYHVFFLWFYFWPTAQDD--YNAF-WHVLRIVAYCMSFANSCANPVAL 366
            |   ::..||:|.:|:.|.:.:.:.......:.::  |.|| |       :.||  ::|.||...
 Frog   287 TLKMLMLVVVVFAVCWFPLNCYLVLMSSKVISSNNAIYFAFHW-------FAMS--STCYNPFIY 342

  Fly   367 YFVSGAFRKHFNRYL-FCRGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCR 430
            .:::.:||......| .||    ||.....|         .|.|.:.   |.||:..:    :|.
 Frog   343 CWLNESFRSELKALLCVCR----RRSPAQSH---------PLQSVSP---QFRHAWTE----NCH 387

  Fly   431 LQETTITTLPNGG---NQNGANISAVE 454
            .::.:.:......   |....:||:||
 Frog   388 FKQGSSSQAAGSATNVNSGRTDISSVE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 78/306 (25%)
TM helix 1 83..109 CDD:320593 5/25 (20%)
TM helix 2 116..142 CDD:320593 6/25 (24%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 4/19 (21%)
TM helix 5 252..277 CDD:320593 9/24 (38%)
TM helix 6 300..330 CDD:320593 10/33 (30%)
TM helix 7 345..370 CDD:320593 5/24 (21%)
gpr83.2NP_001072505.1 7tmA_GPR83 70..353 CDD:320511 78/306 (25%)
TM helix 1 71..97 CDD:320511 5/25 (20%)
TM helix 2 104..129 CDD:320511 6/24 (25%)
TM helix 3 142..172 CDD:320511 12/29 (41%)
TM helix 4 183..204 CDD:320511 5/20 (25%)
TM helix 5 233..262 CDD:320511 11/33 (33%)
TM helix 6 282..312 CDD:320511 8/29 (28%)
TM helix 7 321..346 CDD:320511 9/33 (27%)

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