DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and TACR1

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001049.1 Gene:TACR1 / 6869 HGNCID:11526 Length:407 Species:Homo sapiens


Alignment Length:469 Identity:113/469 - (24%)
Similarity:203/469 - (43%) Gaps:106/469 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NLVSMETDLAMNIGLDTSGEAPTALPPMPN-VTETLWDLAMVVSQSTQWPLLDTGSSENFSELVT 67
            |::.:::||:.||..:||         .|| ..:..|.:.:       |                
Human     3 NVLPVDSDLSPNISTNTS---------EPNQFVQPAWQIVL-------W---------------- 35

  Fly    68 TETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVII 132
                             ...:.:|.|..|:||..::.:.|:.::||.|.|.::::||.|:     
Human    36 -----------------AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAE----- 78

  Fly   133 TTVPLASTVYTVEY-----WPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHA 192
            .::...:||....|     |.||.|.|....|....::..|::::||::.|||.||:.||:.   
Human    79 ASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQP--- 140

  Fly   193 HGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVIC-YPYPEEWGINYAKSMV 256
                |.:...|......||:||:|...|....|..:.:    .|.|:| ..:||.....|.|...
Human   141 ----RLSATATKVVICVIWVLALLLAFPQGYYSTTETM----PSRVVCMIEWPEHPNKIYEKVYH 197

  Fly   257 LLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAV-RQVRARRKVAVTVLAFVVIFGICF 320
            :...::.|.:||:||...|.::.:.| :::.:||:..... .||.|:|||...::..|..|.||:
Human   198 ICVTVLIYFLPLLVIGYAYTVVGITL-WASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICW 261

  Fly   321 LPYHVFFLWFYFWPTAQDDY-NAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHF-NRYLFC 383
            ||:|:|||..|..|   |.| ..|...:.:....::.:::..||:....::..||..| :.:..|
Human   262 LPFHIFFLLPYINP---DLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCC 323

  Fly   384 RGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCRLQETTITTL-------PN 441
            ...|.     |.::        .|...:::..|::.|.|:.:    || ||||:|:       |.
Human   324 PFISA-----GDYE--------GLEMKSTRYLQTQGSVYKVS----RL-ETTISTVVGAHEEEPE 370

  Fly   442 GGNQNGANISAVEL 455
            .|.:  |..|:::|
Human   371 DGPK--ATPSSLDL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 31/104 (30%)
7tm_1 98..364 CDD:278431 76/273 (28%)
TACR1NP_001049.1 7tmA_NK1R 33..316 CDD:320668 83/342 (24%)
TM helix 1 35..59 CDD:320668 6/56 (11%)
TM helix 2 68..90 CDD:320668 6/26 (23%)
TM helix 3 106..128 CDD:320668 4/21 (19%)
TM helix 4 149..165 CDD:320668 5/15 (33%)
TM helix 5 194..217 CDD:320668 6/22 (27%)
TM helix 6 247..269 CDD:320668 8/21 (38%)
TM helix 7 284..309 CDD:320668 2/24 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..407 5/21 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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