DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and tacr3l

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001243564.1 Gene:tacr3l / 559201 ZFINID:ZDB-GENE-061207-19 Length:395 Species:Danio rerio


Alignment Length:411 Identity:108/411 - (26%)
Similarity:179/411 - (43%) Gaps:64/411 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SSENFSELVTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILS 122
            |..|.:...|.:....|:    ...:..:.::.:..|.|.||..:|.:.|:.::||.|.|.::|:
Zfish     6 SGSNVTRNFTNQFVQPPW----RVAVWSVAYSSVLAVAVFGNLIVIWIILAHKRMRTVTNYFLLN 66

  Fly   123 LALADL-LVIITTVPLASTVY-TVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVD 185
            ||.:|. :....|  |.:.:| |...|.:|...|....|....::..|::::||::.|||.||:.
Zfish    67 LAFSDASMAAFNT--LINFIYATHGEWYFGEVYCKFHNFFPVTAVFASIYSMTAIAVDRYMAIIH 129

  Fly   186 PLRKFHAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICY---PYPEEW 247
            ||:.       |.:...|....|.||.||::...|....|..:.:    ....|||   |.|.|.
Zfish   130 PLKP-------RLSATATKVVIVCIWALAVILAFPLCFYSTTRTM----PRRTICYVAWPRPAED 183

  Fly   248 GINYAKSMVLLHFLV---YYAIPLVVIAVFYVLIALHLMYSASVPGE-IQGAVRQVRARRKVAVT 308
            ...|       |.:|   .|.:||||:.:.|.::.:.| :...:||: ....|.|:||:|||...
Zfish   184 SFMY-------HIIVTVLVYMLPLVVMGITYTIVGVTL-WGGEIPGDSSDNYVGQLRAKRKVVKM 240

  Fly   309 VLAFVVIFGICFLPYHVFFL------WFYFWPTAQDDY-NAFWHVLRIVAYCMSFANSCANPVAL 366
            ::..||.|.:|:||||::|:      ....|.:.|..| :..|         ::.:::..||:..
Zfish   241 MIVVVVTFALCWLPYHIYFIVTGLNKRLNKWKSIQQVYLSVLW---------LAMSSTMYNPIIY 296

  Fly   367 YFVSGAFRKHFNRYL----FCRGAS--------GRRKKRGQHDTFCMHR-DTSLTSTASKRFQSR 418
            ..::|.||..|.|..    |.:.:|        .|...|.|.....:.| ||||.....:|.| |
Zfish   297 CCLNGRFRAGFKRAFRWCPFIQVSSYDELELRPTRLHPRNQSSMCTLSRVDTSLHGEDPRRSQ-R 360

  Fly   419 HSCYQSTIRSCRLQETTITTL 439
            .|.....:...|.:.|..|.|
Zfish   361 KSTKSQCLVEVRDENTPATKL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 31/101 (31%)
7tm_1 98..364 CDD:278431 78/281 (28%)
tacr3lNP_001243564.1 7tm_4 32..>160 CDD:304433 40/136 (29%)
7tm_1 42..296 CDD:278431 79/283 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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