Protein Alignment CCHa1-R and Sstr2

DIOPT Version :10

• Sequence 1: NP_611241.2
• Gene: CCHa1-R / 37004
• FlyBaseID: FBgn0050106
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_062221.1
• Gene: Sstr2 / 54305
• RGDID: 3763
• Length: 369
• Species: Rattus norvegicus
• Alignment Length: 381
• Identity: 105/381 - (27%)
• Similarity: 176/381 - (46%)
• Gaps: 59/381 - (15%)

  Fly    74 PYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLA 138
            ||.......::..::.::.|||:.||..:|.|.|...:|:.:.|.|||:||:||.|.::....||
  Rat    36 PYYDMTSNAVLTFIYFVVCVVGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLA 100

  Fly   139 STVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMT 203
            ..|..| :||:|..:|.:...:..::...|:|.||.:|.|||.|:|.|::     ....|..|..
  Rat   101 MQVALV-HWPFGKAICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIK-----SAKWRRPRTA 159

  Fly   204 LATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPL 268
            ....|::|.:::|..||.:|.:.|:.......|..|  .:|.|.|..|. ..::..|::.:.:||
  Rat   160 KMINVAVWGVSLLVILPIMIYAGLRSNQWGRSSCTI--NWPGESGAWYT-GFIIYAFILGFLVPL 221

  Fly   269 VVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVF---FLWF 330
            .:|.:.|:.|.:.:..|    |...|:.::.::.:||...|...|.:|..|:||:::|   .:..
  Rat   222 TIICLCYLFIIIKVKSS----GIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSV 282

  Fly   331 YFWPT----AQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRK 391
            ...||    ...|:          ...:::|||||||:...|:|..|:|.|...|.....||  .
  Rat   283 AISPTPALKGMFDF----------VVILTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSG--A 335

  Fly   392 KRGQHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCRLQETTIT--TLPNGGNQ 445
            :.|:.             :.||:.:|            ||.|||.|  ||.||..|
  Rat   336 EDGER-------------SDSKQDKS------------RLNETTETQRTLLNGDLQ 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CCHa1-R	NP_611241.2	7tmA_Bombesin_R-like	82..377	CDD:320593	84/301 (28%)
		TM helix 1	83..109	CDD:320593	8/25 (32%)
		TM helix 2	116..142	CDD:320593	11/25 (44%)
		TM helix 3	154..184	CDD:320593	10/29 (34%)
		TM helix 4	201..221	CDD:320593	5/19 (26%)
		TM helix 5	252..277	CDD:320593	5/24 (21%)
		TM helix 6	300..330	CDD:320593	9/32 (28%)
		TM helix 7	345..370	CDD:320593	8/24 (33%)
Sstr2	NP_062221.1	7tmA_SSTR2	44..323	CDD:320637	84/301 (28%)
		TM helix 1	45..71	CDD:320637	8/25 (32%)
		TM helix 2	78..104	CDD:320637	11/25 (44%)
		TM helix 3	115..145	CDD:320637	10/29 (34%)
		TM helix 4	157..179	CDD:320637	6/21 (29%)
		TM helix 5	205..234	CDD:320637	7/29 (24%)
		TM helix 6	249..279	CDD:320637	9/29 (31%)
		TM helix 7	291..316	CDD:320637	9/34 (26%)