DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and AstA-R1

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster


Alignment Length:375 Identity:100/375 - (26%)
Similarity:174/375 - (46%) Gaps:53/375 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LAMVVSQSTQWPLLDTGSSENFSELVTTETPYVPYG--------------------------RRP 79
            ||.::|   .||....|::.|.|.:..:.:....|.                          .|.
  Fly    11 LATLIS---SWPKASWGATGNGSIISVSNSSGNNYAFTSEHTDHSDHNANDSMEYDAESVALERI 72

  Fly    80 ETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTV 144
            .:.|||:.|.:|...|:||||.:|:|.::.:|||:..|..|::||::|:|.:|..||..:|.|.:
  Fly    73 VSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVL 137

  Fly   145 EYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAVS 209
            ..||:|:..|...::|..|:...||:||..:|.||:.|:|.|:...     ..|..|......:.
  Fly   138 PEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSM-----SLRTERNATLAIMC 197

  Fly   210 IWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEE--WG-INYAKSMVLLHFLVYYAIPLVVI 271
            .|:..:...:|..:..:::....:..:...|....||  |. :.:..|.    ||..|..||.:|
  Fly   198 AWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSF----FLSSYVAPLTLI 258

  Fly   272 AVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFLWFYFWPTA 336
            ...|:.:...|..||  || .:.:....:.:|:|...|:..|:.|.||:||.||..:.     .|
  Fly   259 CFLYMGMLARLWKSA--PG-CKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVL-----KA 315

  Fly   337 QDDYNAFWH---VLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC 383
            .:.|... |   :::|:::.:::.|||.||:...|:|..|||.|.:.::|
  Fly   316 LNLYGGS-HLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 88/300 (29%)
TM helix 1 83..109 CDD:320593 12/25 (48%)
TM helix 2 116..142 CDD:320593 10/25 (40%)
TM helix 3 154..184 CDD:320593 11/29 (38%)
TM helix 4 201..221 CDD:320593 2/19 (11%)
TM helix 5 252..277 CDD:320593 8/24 (33%)
TM helix 6 300..330 CDD:320593 11/29 (38%)
TM helix 7 345..370 CDD:320593 8/27 (30%)
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 88/300 (29%)
TM helix 1 76..102 CDD:320224 12/25 (48%)
TM helix 2 109..135 CDD:320224 10/25 (40%)
TM helix 3 147..177 CDD:320224 11/29 (38%)
TM helix 4 189..209 CDD:320224 2/19 (11%)
TM helix 5 239..268 CDD:320224 8/32 (25%)
TM helix 6 284..314 CDD:320224 11/34 (32%)
TM helix 7 326..351 CDD:320224 7/24 (29%)

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