DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and TkR99D

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001263092.1 Gene:TkR99D / 43551 FlyBaseID:FBgn0004622 Length:564 Species:Drosophila melanogaster


Alignment Length:518 Identity:139/518 - (26%)
Similarity:231/518 - (44%) Gaps:120/518 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LAMVVSQSTQWPLLDTG-------SSENFSELVTTETPYV--------PYGRRPET----YIVP- 85
            ::.|:|.|...||.|.|       ||.|.|:.::|:.|.|        ......||    ::|| 
  Fly    34 MSSVLSASNHTPLPDFGQELALSTSSFNHSQTLSTDLPAVGDVEDAAEDAAASMETGSFAFVVPW 98

  Fly    86 ---ILFALIF--VVGVLGNGTLIVVF--LSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYT 143
               :|::::|  :|.|...|.||||:  ::.::||.|.|.:|::|::||.:|       :|...|
  Fly    99 WRQVLWSILFGGMVIVATGGNLIVVWIVMTTKRMRTVTNYFIVNLSIADAMV-------SSLNVT 156

  Fly   144 VEY-------WPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATR 201
            ..|       ||:|.|.|.||:|:..:||..|||||.|:|.|||.||:.||:.       |.:.|
  Fly   157 FNYYYMLDSDWPFGEFYCKLSQFIAMLSICASVFTLMAISIDRYVAIIRPLQP-------RMSKR 214

  Fly   202 MTLATAVSIWLLAILCGLPALIGSNLKHL---GINEKSIVICYPYPEEW---GINYAKSMVLLHF 260
            ..||.|..|||.:.|...|.:|....:.:   |::.::  :|||   ||   ..|::....|.:.
  Fly   215 CNLAIAAVIWLASTLISCPMMIIYRTEEVPVRGLSNRT--VCYP---EWPDGPTNHSTMESLYNI 274

  Fly   261 LVY---YAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLP 322
            |:.   |.:|:|.:.|.|..:.:.|..|.::.......|..||::|:|...::..|:||.||:||
  Fly   275 LIIILTYFLPIVSMTVTYSRVGIELWGSKTIGECTPRQVENVRSKRRVVKMMIVVVLIFAICWLP 339

  Fly   323 YHVFFLWFYFWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHF---------- 377
            :|.:|:....:|...:  ..|...|.:..|.::.:||..||:...:::..||..|          
  Fly   340 FHSYFIITSCYPAITE--APFIQELYLAIYWLAMSNSMYNPIIYCWMNSRFRYGFKMVFRWCLFV 402

  Fly   378 --------------NRYLFCRGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRS 428
                          :|| .|.|:....:.: ::||     ..|:..|.....:|....:..|.||
  Fly   403 RVGTEPFSRRENLTSRY-SCSGSPDHNRIK-RNDT-----QKSILYTCPSSPKSHRISHSGTGRS 460

  Fly   429 CRLQET-TITTLPNGGNQNGANISAVELALPVLQAPGHNEAHAPPSYGFLPLNEIVQQTRSSP 490
            ..|:.: ...:|.:||:..|                ||.:.        |...:.:||..|.|
  Fly   461 ATLRNSLPAESLSSGGSGGG----------------GHRKR--------LSYQQEMQQRWSGP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 43/110 (39%)
7tm_1 98..364 CDD:278431 89/283 (31%)
TkR99DNP_001263092.1 7tm_4 113..396 CDD:304433 94/303 (31%)
7tm_1 118..381 CDD:278431 90/283 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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