DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and TkR99D

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001263092.1 Gene:TkR99D / 43551 FlyBaseID:FBgn0004622 Length:564 Species:Drosophila melanogaster


Alignment Length:518 Identity:139/518 - (26%)
Similarity:231/518 - (44%) Gaps:120/518 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LAMVVSQSTQWPLLDTG-------SSENFSELVTTETPYV--------PYGRRPET----YIVP- 85
            ::.|:|.|...||.|.|       ||.|.|:.::|:.|.|        ......||    ::|| 
  Fly    34 MSSVLSASNHTPLPDFGQELALSTSSFNHSQTLSTDLPAVGDVEDAAEDAAASMETGSFAFVVPW 98

  Fly    86 ---ILFALIF--VVGVLGNGTLIVVF--LSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYT 143
               :|::::|  :|.|...|.||||:  ::.::||.|.|.:|::|::||.:|       :|...|
  Fly    99 WRQVLWSILFGGMVIVATGGNLIVVWIVMTTKRMRTVTNYFIVNLSIADAMV-------SSLNVT 156

  Fly   144 VEY-------WPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATR 201
            ..|       ||:|.|.|.||:|:..:||..|||||.|:|.|||.||:.||:.       |.:.|
  Fly   157 FNYYYMLDSDWPFGEFYCKLSQFIAMLSICASVFTLMAISIDRYVAIIRPLQP-------RMSKR 214

  Fly   202 MTLATAVSIWLLAILCGLPALIGSNLKHL---GINEKSIVICYPYPEEW---GINYAKSMVLLHF 260
            ..||.|..|||.:.|...|.:|....:.:   |::.::  :|||   ||   ..|::....|.:.
  Fly   215 CNLAIAAVIWLASTLISCPMMIIYRTEEVPVRGLSNRT--VCYP---EWPDGPTNHSTMESLYNI 274

  Fly   261 LVY---YAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLP 322
            |:.   |.:|:|.:.|.|..:.:.|..|.::.......|..||::|:|...::..|:||.||:||
  Fly   275 LIIILTYFLPIVSMTVTYSRVGIELWGSKTIGECTPRQVENVRSKRRVVKMMIVVVLIFAICWLP 339

  Fly   323 YHVFFLWFYFWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHF---------- 377
            :|.:|:....:|...:  ..|...|.:..|.::.:||..||:...:::..||..|          
  Fly   340 FHSYFIITSCYPAITE--APFIQELYLAIYWLAMSNSMYNPIIYCWMNSRFRYGFKMVFRWCLFV 402

  Fly   378 --------------NRYLFCRGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRS 428
                          :|| .|.|:....:.: ::||     ..|:..|.....:|....:..|.||
  Fly   403 RVGTEPFSRRENLTSRY-SCSGSPDHNRIK-RNDT-----QKSILYTCPSSPKSHRISHSGTGRS 460

  Fly   429 CRLQET-TITTLPNGGNQNGANISAVELALPVLQAPGHNEAHAPPSYGFLPLNEIVQQTRSSP 490
            ..|:.: ...:|.:||:..|                ||.:.        |...:.:||..|.|
  Fly   461 ATLRNSLPAESLSSGGSGGG----------------GHRKR--------LSYQQEMQQRWSGP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 98/318 (31%)
TM helix 1 83..109 CDD:320593 11/33 (33%)
TM helix 2 116..142 CDD:320593 7/25 (28%)
TM helix 3 154..184 CDD:320593 17/29 (59%)
TM helix 4 201..221 CDD:320593 8/19 (42%)
TM helix 5 252..277 CDD:320593 7/27 (26%)
TM helix 6 300..330 CDD:320593 12/29 (41%)
TM helix 7 345..370 CDD:320593 6/24 (25%)
TkR99DNP_001263092.1 7tmA_TACR 102..392 CDD:320512 96/310 (31%)
TM helix 1 103..129 CDD:320512 9/25 (36%)
TM helix 2 136..162 CDD:320512 9/32 (28%)
TM helix 3 174..204 CDD:320512 17/29 (59%)
TM helix 4 215..236 CDD:320512 8/20 (40%)
TM helix 5 269..298 CDD:320512 7/28 (25%)
TM helix 6 317..347 CDD:320512 12/29 (41%)
TM helix 7 360..385 CDD:320512 6/24 (25%)

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