DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and ETHR

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster


Alignment Length:489 Identity:124/489 - (25%)
Similarity:202/489 - (41%) Gaps:97/489 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PYVPYGRRPETYI--VPILFAL-IFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVII 132
            |.:|      :||  ..:.|.: |.::||:||..:.:|.:..:.|||..|.::.:|::|||||::
  Fly     3 PQIP------SYIRTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLL 61

  Fly   133 TTVP--LASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGG 195
            ...|  |.......|.|..|..:|....|::......||.|:.|:|.:||:||.:||:..:....
  Fly    62 VCTPTVLVEVNTRPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTK 126

  Fly   196 GRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLG-INEKSIVICYPYP-EEWGINYAKSMVLL 258
            ||     .:...|..|.:|.|...|.|..:..|... |:..|:.:|.... .:|.:    :..|:
  Fly   127 GR-----AILICVLAWGIAALFTSPILWVAEYKLAEYIDGSSVAVCLTQAISDWTL----AFFLM 182

  Fly   259 HFLVYYAIPLVVIAVFYVLIALHLM--YSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFL 321
            ...|::.:|.|.:.|.|.:||.:|:  .:|.:..........::||::|.:.:.|.|:.|.:|.|
  Fly   183 TISVFFVVPFVTLVVLYGIIARNLVSNRAAMLRARPTKPELSLKARKQVVLMLGAVVLSFFVCLL 247

  Fly   322 PYHVFFLWFYFWPTAQDDYNAFWHVLRIVAY------C--MSFANSCANPVALYFVSGAFRKHFN 378
            |:.|..||... .|.|.     .|.|.:|.|      |  |.:.||..||:....:|..||:.|.
  Fly   248 PFRVLTLWIIL-STDQT-----LHDLGLVRYYSLLYFCRIMLYLNSAMNPILYNLMSTKFRRGFK 306

  Fly   379 RYLFCRGAS---------GRRKK---RGQHDTFCMHRDT---------SLTSTASKRFQSRHS-- 420
            |  .|:.|.         ||||:   ||:..|..:...|         :.|...|....||.|  
  Fly   307 R--LCQDAGRLLLELVTLGRRKEDSSRGRRGTLSLGMGTNTNTNTNSSNATGATSSSILSRSSNR 369

  Fly   421 -CYQSTIRS-----------------CRLQETTITTLPNGGNQNGANISAVELALPVLQAPGHNE 467
             |.:...|:                 ..||.:|:      |......:|...| :|:   ..|..
  Fly   370 RCSEDISRTRLKIEMQMPCGSDLEAMAMLQHSTL------GKGIARRVSDSRL-MPL---RNHQP 424

  Fly   468 AHAPPSYGFLPLNEIVQQTRSS----PAKFQESL 497
            ....|...|  ..|.:::.:.|    |.|.:|.|
  Fly   425 RRHKPQISF--DEESLEENKRSEAKIPTKCREKL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 34/102 (33%)
7tm_1 98..364 CDD:278431 77/279 (28%)
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433 39/129 (30%)
7tm_1 27..294 CDD:278431 78/281 (28%)
7tm_4 <102..307 CDD:304433 60/219 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438995
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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