DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and PK2-R2

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster


Alignment Length:423 Identity:110/423 - (26%)
Similarity:185/423 - (43%) Gaps:46/423 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ELVTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADL 128
            ||:.|.||..|...   ...:.:.:||||:.|||||....:|......|....|.|:.:||::|:
  Fly    52 ELLPTVTPMTPLSL---LATLSVGYALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISDM 113

  Fly   129 LVIITTVPLASTVYTV---EYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKF 190
            :::.:.:|  ..:|.:   :.:|:...:|.|...:.:.:...:|.|:||.:.:||.||..|.|: 
  Fly   114 ILLCSGMP--QDLYNLWHPDNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFRQ- 175

  Fly   191 HAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSM 255
            |......||.:...|    ||:.|:|..||..|..::...|:...    |....:.:...:|.|.
  Fly   176 HTMSKLSRAVKFIFA----IWIAALLLALPQAIQFSVVMQGMGTS----CTMKNDFFAHVFAVSG 232

  Fly   256 VLLHFLVYYAIPLVVIAVFYVLIALHLMYS---ASVPGEIQGAVRQVRARRKVAVTVLAFVVIFG 317
            .|     ::..|:..|.|.||||.:.|..|   .::|.......|.:.|:.:|...::|..|.|.
  Fly   233 FL-----FFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYDVNRGISAQTRVIRMLVAVAVAFF 292

  Fly   318 ICFLPYHVFFLWFYFWPTAQDDYNAFWHVLRIVAY---CMSFANSCANPVALYFVSGAFRKHFNR 379
            ||:.|:|...|...:..|:..:...|..|..|:.|   .:.|.::|.||:....:|..||:.| :
  Fly   293 ICWAPFHAQRLMAVYGSTSGIESQWFNDVFSILDYTSGVLYFLSTCINPLLYNIMSHKFREAF-K 356

  Fly   380 YLFCR--GASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCRLQETTITTLPNG 442
            ....|  |..|:.:.||...|:...|   ...|.|.|..:..|     :|:......|.||..||
  Fly   357 VTLARHFGLGGKNQGRGLPHTYSALR---RNQTGSLRLHTTDS-----VRTTMTSMATTTTGLNG 413

  Fly   443 -------GNQNGANISAVELALPVLQAPGHNEA 468
                   |...|.::....::|..:|..|.|.:
  Fly   414 SANGSGNGTTTGQSVRLNRVSLDSVQMQGQNRS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 80/303 (26%)
TM helix 1 83..109 CDD:320593 10/25 (40%)
TM helix 2 116..142 CDD:320593 6/25 (24%)
TM helix 3 154..184 CDD:320593 9/29 (31%)
TM helix 4 201..221 CDD:320593 6/19 (32%)
TM helix 5 252..277 CDD:320593 7/24 (29%)
TM helix 6 300..330 CDD:320593 10/29 (34%)
TM helix 7 345..370 CDD:320593 7/27 (26%)
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 80/301 (27%)
TM helix 1 69..94 CDD:320262 10/24 (42%)
TM helix 2 101..127 CDD:320262 7/27 (26%)
TM helix 3 140..170 CDD:320262 9/29 (31%)
TM helix 4 182..204 CDD:320262 9/25 (36%)
TM helix 5 225..253 CDD:320262 10/32 (31%)
TM helix 6 275..305 CDD:320262 10/29 (34%)
TM helix 7 323..348 CDD:320262 6/24 (25%)

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