DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and ednrab

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001297024.1 Gene:ednrab / 405866 ZFINID:ZDB-GENE-040426-2364 Length:408 Species:Danio rerio


Alignment Length:320 Identity:106/320 - (33%)
Similarity:163/320 - (50%) Gaps:32/320 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 YIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEY 146
            |:..:|...|||||::|||||:.:....|.|||.||..|.||||.||:.|...:|:.........
Zfish    68 YVNTLLSCAIFVVGIVGNGTLLRIICQNRSMRNGPNALIASLALGDLIYITIDIPINVYKLLAMR 132

  Fly   147 WP-----YGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLAT 206
            ||     :|.|||.|..|::..|:|::|..|.|||.|||.|:....|   ..|.|     :.::|
Zfish   133 WPFDDSVFGLFLCKLMPFLQKASVGITVLNLCALSVDRYRAVASWNR---VQGVG-----IPVST 189

  Fly   207 A---VSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSM-VLLHFLVYYAIP 267
            |   :.|||||::..:|..||..:.....|..:|..|...||...:.:.:.: |...|..|:.:|
Zfish   190 ALEIICIWLLAVVLAVPEAIGFKMVSFEYNNVTIRTCMLKPETPFMTFYRDVKVWWLFGFYFCVP 254

  Fly   268 LVVIAVFYVLIALHLMYSASVPGEIQGAVRQ-VRARRKVAVTVLAFVVIFGICFLPYH---VFFL 328
            |:..||||.|:...::  ::..|.::.::.: ::.||:||..|.:.|:||.:|:.|.|   :...
Zfish   255 LLCTAVFYTLMTCEML--SNRKGSLKFSLSEHLKQRREVAKAVFSLVLIFALCWFPLHLSRILKK 317

  Fly   329 WFYFWPTAQDDYNA-----FWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC 383
            ..||    |:|...     |..|...::..::..|||.||:.|||||..|:..|...|.|
Zfish   318 MVYF----QNDVGRCDLLNFLLVFDYLSINLATINSCINPIILYFVSKKFKNCFRSCLCC 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 44/104 (42%)
7tm_1 98..364 CDD:278431 89/283 (31%)
ednrabNP_001297024.1 7tm_GPCRs 68..367 CDD:333717 103/312 (33%)
TM helix 1 70..94 CDD:320095 11/23 (48%)
TM helix 2 103..125 CDD:320095 10/21 (48%)
TM helix 3 146..168 CDD:320095 8/21 (38%)
TM helix 4 191..207 CDD:320095 5/15 (33%)
TM helix 5 240..263 CDD:320095 8/22 (36%)
TM helix 6 289..314 CDD:320095 10/24 (42%)
TM helix 7 335..360 CDD:320095 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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