DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and ednrab

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001297024.1 Gene:ednrab / 405866 ZFINID:ZDB-GENE-040426-2364 Length:408 Species:Danio rerio


Alignment Length:320 Identity:106/320 - (33%)
Similarity:163/320 - (50%) Gaps:32/320 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 YIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEY 146
            |:..:|...|||||::|||||:.:....|.|||.||..|.||||.||:.|...:|:.........
Zfish    68 YVNTLLSCAIFVVGIVGNGTLLRIICQNRSMRNGPNALIASLALGDLIYITIDIPINVYKLLAMR 132

  Fly   147 WP-----YGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLAT 206
            ||     :|.|||.|..|::..|:|::|..|.|||.|||.|:....|   ..|.|     :.::|
Zfish   133 WPFDDSVFGLFLCKLMPFLQKASVGITVLNLCALSVDRYRAVASWNR---VQGVG-----IPVST 189

  Fly   207 A---VSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSM-VLLHFLVYYAIP 267
            |   :.|||||::..:|..||..:.....|..:|..|...||...:.:.:.: |...|..|:.:|
Zfish   190 ALEIICIWLLAVVLAVPEAIGFKMVSFEYNNVTIRTCMLKPETPFMTFYRDVKVWWLFGFYFCVP 254

  Fly   268 LVVIAVFYVLIALHLMYSASVPGEIQGAVRQ-VRARRKVAVTVLAFVVIFGICFLPYH---VFFL 328
            |:..||||.|:...::  ::..|.::.::.: ::.||:||..|.:.|:||.:|:.|.|   :...
Zfish   255 LLCTAVFYTLMTCEML--SNRKGSLKFSLSEHLKQRREVAKAVFSLVLIFALCWFPLHLSRILKK 317

  Fly   329 WFYFWPTAQDDYNA-----FWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC 383
            ..||    |:|...     |..|...::..::..|||.||:.|||||..|:..|...|.|
Zfish   318 MVYF----QNDVGRCDLLNFLLVFDYLSINLATINSCINPIILYFVSKKFKNCFRSCLCC 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 103/312 (33%)
TM helix 1 83..109 CDD:320593 11/25 (44%)
TM helix 2 116..142 CDD:320593 11/25 (44%)
TM helix 3 154..184 CDD:320593 14/29 (48%)
TM helix 4 201..221 CDD:320593 7/22 (32%)
TM helix 5 252..277 CDD:320593 9/25 (36%)
TM helix 6 300..330 CDD:320593 11/32 (34%)
TM helix 7 345..370 CDD:320593 9/24 (38%)
ednrabNP_001297024.1 7tm_GPCRs 68..367 CDD:475119 103/312 (33%)
TM helix 1 70..94 CDD:410628 11/23 (48%)
TM helix 2 103..125 CDD:410628 10/21 (48%)
TM helix 3 146..168 CDD:410628 8/21 (38%)
TM helix 4 191..207 CDD:410628 5/15 (33%)
TM helix 5 240..263 CDD:410628 8/22 (36%)
TM helix 6 292..314 CDD:410628 8/21 (38%)
TM helix 7 335..360 CDD:410628 9/24 (38%)

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