DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and oprl1

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_073794306.1 Gene:oprl1 / 402851 ZFINID:ZDB-GENE-040312-4 Length:401 Species:Danio rerio


Alignment Length:355 Identity:97/355 - (27%)
Similarity:167/355 - (47%) Gaps:52/355 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NFSELVTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLAL 125
            |||....::: :.|.|.:   ..:.:::.::.|||::||..::.|.:...:|:...|.||.:|||
Zfish    65 NFSTFNESDS-FFPKGFK---ITIAVVYMIVCVVGLVGNCLVMYVIIRYTKMKTATNIYIFNLAL 125

  Fly   126 ADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKF 190
            ||.|| :.|:|...|...:.:||:|:.||.:...:...::..||||||.:|.|||.|:..|::..
Zfish   126 ADALV-LATLPFQGTDVFLGFWPFGNALCKVVVSIDYYNMFTSVFTLTVMSMDRYVAVCHPVKAL 189

  Fly   191 HAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGINEKSI--VICYPYPEE-WGINYA 252
                 ..|.........:.:|:||...|:||::..:::.  .|.:||  ::..|.|.. |...:.
Zfish   190 -----DMRTPHKAKVVNICVWVLASAIGVPAMVLGDVEQ--DNGESIECILVLPDPRSYWDPVFG 247

  Fly   253 KSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFG 317
            ..:.||.||    ||:.:|:|.|.|:...|. |..:   :.|:..:.|..|::...||..|..|.
Zfish   248 TCVFLLSFL----IPVAIISVCYSLMVKRLR-SVRI---LSGSKEKDRNLRRITRMVLVVVAAFV 304

  Fly   318 ICFLPYHVFFLWFYFWPTAQD-DYN-------AFWHVLRIVAYC--MSFANSCANPVALYFVSGA 372
            :|:.|..:..|       ||. .:|       .|.|      :|  :.:.||..|||...|:...
Zfish   305 VCWTPIQIMAL-------AQSLGFNLASVQTVVFMH------FCIALGYVNSSLNPVLYAFLDEN 356

  Fly   373 FRKHFNRYLFCR----GASGRRKKRGQHDT 398
            |::.|..  ||.    |...::..|.:|.|
Zfish   357 FKRCFRE--FCHPSRFGIDAQQSGRMRHIT 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 85/307 (28%)
TM helix 1 83..109 CDD:320593 6/25 (24%)
TM helix 2 116..142 CDD:320593 13/25 (52%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 4/19 (21%)
TM helix 5 252..277 CDD:320593 9/24 (38%)
TM helix 6 300..330 CDD:320593 9/29 (31%)
TM helix 7 345..370 CDD:320593 8/26 (31%)
oprl1XP_073794306.1 None

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