DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Ntsr1

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001102437.1 Gene:Ntsr1 / 366274 RGDID:1306076 Length:424 Species:Rattus norvegicus


Alignment Length:448 Identity:108/448 - (24%)
Similarity:188/448 - (41%) Gaps:79/448 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TSGEAPTALP---PMPNVTETLWDLAMVVSQSTQWPLLDTGSSENFSELVTTETPYVPYGRRPET 81
            |.|| |.|.|   |...:..|...|::            :..|.|.|| ..|..|........:.
  Rat    11 TPGE-PDAQPFSGPQSEMEATFLALSL------------SNGSGNTSE-SDTAGPNSDLDVNTDI 61

  Fly    82 Y---IVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNT---YILSLALADLLVIITTVP--LA 138
            |   :|..::..:||||.:||..........:.::::.:|   ::.||||:|||:::..:|  |.
  Rat    62 YSKVLVTAIYLALFVVGTVGNSVTAFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELY 126

  Fly   139 STVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMT 203
            :.::....|.:|...|....|::|.....:...:.:||.:||.||..|.:.....  .|..|:..
  Rat   127 NFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLM--SRSRTKKF 189

  Fly   204 LATAVSIWLLAILCGLPALIGSNLKHLGINEKS-------IVICYPYPEEWGINYAKSMVLLHFL 261
            ::   :|||.:.|..:|.|.     .:|:..:|       .::|.|..:...:   |.::.::..
  Rat   190 IS---AIWLASALLAIPMLF-----TMGLQNRSGDGTHPGGLVCTPIVDTATV---KVVIQVNTF 243

  Fly   262 VYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAV--------------------RQVRARRKVA 306
            :.:..|::||::...:||..|........| ||.|                    .:|:|.|...
  Rat   244 MSFLFPMLVISILNTVIANKLTVMVHQAAE-QGRVCTVGTHNGLEHSTFNMTIEPGRVQALRHGV 307

  Fly   307 VTVLAFVVIFGICFLPYHVFFLWFYF-----WPTAQDDYNAFWHVLRIVAYCMSFANSCANPVAL 366
            :.:.|.|:.|.:|:|||||..|.|.:     |.|...|   |:|...::...:.:.:|..||:..
  Rat   308 LVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFD---FYHYFYMLTNALFYVSSAINPILY 369

  Fly   367 YFVSGAFRKHFNRYL--FCRGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCY 422
            ..||..||:.|...|  .|.|...|||||   .||....::..::.|.....:|.:.|
  Rat   370 NLVSANFRQVFLSTLACLCPGWRHRRKKR---PTFSRKPNSMSSNHAFSTSATRETLY 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 28/104 (27%)
7tm_1 98..364 CDD:278431 68/302 (23%)
Ntsr1NP_001102437.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 6/12 (50%)
7tm_1 81..369 CDD:278431 69/304 (23%)
Neurotensin binding 326..349 7/25 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..424 6/29 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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