DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and CCHa2-R

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster


Alignment Length:444 Identity:205/444 - (46%)
Similarity:267/444 - (60%) Gaps:56/444 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIANLVSMETDLAMNI------GLDTSGEAPTALPPMPNVTETLWDLAMVVSQSTQWPLLDTGSS 59
            |.|:|:.:...||..:      |.:.||...|               ...:.|..:...||.|.:
  Fly     1 MYASLMDVGQTLAARLADSDGNGANDSGLLAT---------------GQGLEQEQEGLALDMGHN 50

  Fly    60 ENFSELVTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLA 124
            .:....:   .||||...|||||||.:|:.|||:|||||||||:::|...|.|||:|||||||||
  Fly    51 ASADGGI---VPYVPVLDRPETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLA 112

  Fly   125 LADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRK 189
            |||||||:..||:|:.|||.|.||:...:|.:|||.||:||||||||||||||:||.|||:||||
  Fly   113 LADLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRK 177

  Fly   190 FHAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGI----NEKSIVICYPY--PEEWG 248
            .       :...:|:.|||.||:||||.|:|:::.|::|...:    ...:|.:|.|:  ||   
  Fly   178 L-------QTKPLTVFTAVMIWILAILLGMPSVLFSDIKSYPVFTATGNMTIEVCSPFRDPE--- 232

  Fly   249 INYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSA-SVPGEIQG--AVRQVRARRKVAVTVL 310
              |||.||....||||.:||.:|...|:::|..|..|| ::|||.|.  :..|.|||..||..|:
  Fly   233 --YAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVV 295

  Fly   311 AFVVIFGICFLPYHVFFLWFYFWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRK 375
            ||||:|.|||.|||||.||::|:|||::|::.||:|||||.:|.||.|||.||||||.|||.||:
  Fly   296 AFVVVFFICFFPYHVFELWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQ 360

  Fly   376 HFNRYLFCRGASGRRKKRGQHDT----------FCMHRDTSLTSTASKRFQSRH 419
            ||||||.|.... |:....||.|          ..|.|.|.:..||.....|.|
  Fly   361 HFNRYLCCICVK-RQPHLRQHSTATGMMDNTSVMSMRRSTYVGGTAGNLRASLH 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 68/99 (69%)
7tm_1 98..364 CDD:278431 145/274 (53%)
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 166/303 (55%)
TM helix 1 71..97 CDD:320593 16/25 (64%)
TM helix 2 104..130 CDD:320593 19/25 (76%)
TM helix 3 142..172 CDD:320593 23/29 (79%)
TM helix 4 182..202 CDD:320593 11/19 (58%)
TM helix 5 234..259 CDD:320593 12/24 (50%)
TM helix 6 285..315 CDD:320593 20/29 (69%)
TM helix 7 330..355 CDD:320593 17/24 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469114
Domainoid 1 1.000 173 1.000 Domainoid score I3640
eggNOG 1 0.900 - - E1_KOG4219
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 214 1.000 Inparanoid score I3604
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D111475at6656
OrthoFinder 1 1.000 - - FOG0001846
OrthoInspector 1 1.000 - - mtm6429
orthoMCL 1 0.900 - - OOG6_106543
Panther 1 1.100 - - P PTHR45695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4897
SonicParanoid 1 1.000 - - X1046
1211.830

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