DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and oprd1a

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_571333.2 Gene:oprd1a / 30509 ZFINID:ZDB-GENE-990415-199 Length:374 Species:Danio rerio


Alignment Length:334 Identity:98/334 - (29%)
Similarity:157/334 - (47%) Gaps:48/334 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YVPYGRR---------PETYIVPI----LFALIFVVGVLGNGTLIVVFLSVR--QMRNVPNTYIL 121
            :||.||.         |...|:.|    |:::|.|||:|||  ::|::..||  :::...|.||.
Zfish    31 FVPDGRNYTEPNPVKSPAGIIIAISITALYSVICVVGLLGN--ILVMYGVVRYTKLKTATNIYIF 93

  Fly   122 SLALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDP 186
            :|||||.|. .:|:|..||.|.:..||:|..||.:...:...::..|:||||.:|.|||.|:..|
Zfish    94 NLALADALA-TSTLPFQSTKYLMNTWPFGELLCKVVIAIDYYNMFTSIFTLTMMSVDRYIAVCHP 157

  Fly   187 LRKFHAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINY 251
            :|....     |.........|.||:|:...|:|.:|.:..:....|....::.:|.|:.:....
Zfish   158 VRALEF-----RTPIKAKIINVCIWILSSAVGVPIMIMAVTRVTNQNTTVCMLKFPDPDWYWDTV 217

  Fly   252 AKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIF 316
            .|..|   |:..:.:|::||.:.|.|:.|.|. |..:   :.|:..:.|..|::...||..|..|
Zfish   218 TKICV---FIFAFVVPVLVITICYGLMILRLK-SVRL---LSGSKEKDRNMRRITRMVLVVVAAF 275

  Fly   317 GICFLPYHVFFLWFYFWPTAQDDYN-------AFWHVLRIVAYCMSFANSCANPVALYFVSGAFR 374
            .||:.|.|:|.:     .....|.|       |.||    :...:.:.||..|||...|:...|:
Zfish   276 IICWTPIHIFII-----VKTLVDINQKNPFVIASWH----LCIALGYTNSSLNPVLYAFLDENFK 331

  Fly   375 KHFNRYLFC 383
            :.|..  ||
Zfish   332 RCFRD--FC 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 90/307 (29%)
TM helix 1 83..109 CDD:320593 11/29 (38%)
TM helix 2 116..142 CDD:320593 13/25 (52%)
TM helix 3 154..184 CDD:320593 11/29 (38%)
TM helix 4 201..221 CDD:320593 5/19 (26%)
TM helix 5 252..277 CDD:320593 7/24 (29%)
TM helix 6 300..330 CDD:320593 11/29 (38%)
TM helix 7 345..370 CDD:320593 7/24 (29%)
oprd1aNP_571333.2 7tmA_Delta_opioid_R 54..334 CDD:320217 89/303 (29%)
TM helix 1 55..81 CDD:320217 10/27 (37%)
TM helix 2 88..114 CDD:320217 13/26 (50%)
TM helix 3 125..155 CDD:320217 11/29 (38%)
TM helix 4 167..189 CDD:320217 6/21 (29%)
TM helix 5 214..244 CDD:320217 8/32 (25%)
TM helix 6 263..289 CDD:320217 9/30 (30%)
TM helix 7 302..327 CDD:320217 9/28 (32%)

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