Protein Alignment CCHa1-R and Galr3

DIOPT Version :10

• Sequence 1: NP_611241.2
• Gene: CCHa1-R / 37004
• FlyBaseID: FBgn0050106
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_062046.1
• Gene: Galr3 / 29235
• RGDID: 2658
• Length: 370
• Species: Rattus norvegicus
• Alignment Length: 380
• Identity: 107/380 - (28%)
• Similarity: 181/380 - (47%)
• Gaps: 52/380 - (13%)

  Fly    84 VPILFALIFVVGVLGNGTLIVVFL-----SVRQMRNVPNTYILSLALADLLVIITTVPLASTVYT 143
            ||::|||||::|::|||.::.|.|     :.::..:..:.:||:||:|||..|:..||..:.:||
  Rat    20 VPVIFALIFLLGMVGNGLVLAVLLQPGPSAWQEPSSTTDLFILNLAVADLCFILCCVPFQAAIYT 84

  Fly   144 VEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAV 208
            ::.|.:|:|:|.....:..:::..|.|||.|:|.|||.|:..|||     ....|..|...|...
  Rat    85 LDAWLFGAFVCKTVHLLIYLTMYASSFTLAAVSLDRYLAVRHPLR-----SRALRTPRNARAAVG 144

  Fly   209 SIWLLAILCGLPALIGSNLKHLG-INEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPLVVIA 272
            .:||||.|...|     .|.:.| :...::.:|.|   .|.....:::.:..|...|.:|:.|::
  Rat   145 LVWLLAALFSAP-----YLSYYGTVRYGALELCVP---AWEDARRRALDVATFAAGYLLPVAVVS 201

  Fly   273 VFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFLWFYFWPTAQ 337
            :.|.. .|..:::|..|.....|..:.||..:....:||...::.:|:.|:|...|.|::...|
  Rat   202 LAYGR-TLCFLWAAVGPAGAAAAEARRRATGRAGRAMLAVAALYALCWGPHHALILCFWYGRFA- 264

  Fly   338 DDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKRGQHDTFCMH 402
              ::...:..|:.::|:::||||.||:.....|..||..|.|...|    |||:.|..|..   |
  Rat   265 --FSPATYACRLASHCLAYANSCLNPLVYSLASRHFRARFRRLWPC----GRRRHRHHHRA---H 320

  Fly   403 RDTSLTSTASKRFQ------------SRHSCYQSTIRSCRLQ---ETTITTLPNG 442
            |       |.:|.|            :|...:....|...|:   ||.:|..|.|
  Rat   321 R-------ALRRVQPASSGPAGYPGDARPRGWSMEPRGDALRGGGETRLTLSPRG 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CCHa1-R	NP_611241.2	7tmA_Bombesin_R-like	82..377	CDD:320593	86/298 (29%)
		TM helix 1	83..109	CDD:320593	13/29 (45%)
		TM helix 2	116..142	CDD:320593	10/25 (40%)
		TM helix 3	154..184	CDD:320593	11/29 (38%)
		TM helix 4	201..221	CDD:320593	7/19 (37%)
		TM helix 5	252..277	CDD:320593	5/24 (21%)
		TM helix 6	300..330	CDD:320593	8/29 (28%)
		TM helix 7	345..370	CDD:320593	8/24 (33%)
Galr3	NP_062046.1	7tm_GPCRs	18..302	CDD:475119	86/298 (29%)
		TM helix 1	20..44	CDD:410628	12/23 (52%)
		TM helix 2	58..80	CDD:410628	10/21 (48%)
		TM helix 3	96..118	CDD:410628	5/21 (24%)
		TM helix 4	141..157	CDD:410628	7/20 (35%)
		TM helix 5	182..205	CDD:410628	4/22 (18%)
		TM helix 6	234..256	CDD:410628	5/21 (24%)
		TM helix 7	270..295	CDD:410628	8/24 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	317..370		14/62 (23%)