DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Pgr15l

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001028533.1 Gene:Pgr15l / 245526 MGIID:2676330 Length:456 Species:Mus musculus


Alignment Length:405 Identity:97/405 - (23%)
Similarity:172/405 - (42%) Gaps:81/405 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEYW 147
            ::...:|:|.|:.:.||..:..||:..::::......|.:||::|:|:|:...|.|...:....|
Mouse    74 VLTFAYAVIIVISLFGNSLVCQVFVKHKEIKKSTGLLIFNLAISDILIILLNSPFALARFLSGQW 138

  Fly   148 PYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAVSIWL 212
            .:|..:|.:|.|.:..|:.||..||.|::.||:..|:.|::....|.       ..|.....||.
Mouse   139 VFGRIMCHVSRFAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHS-------QCLFVVAMIWS 196

  Fly   213 LAILCGLPALIGSNLKHL----GINEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPLVVIAV 273
            :|:...||..|..||..|    |......:..:|.|   .|..:|.:.|..|::.|.:||:||.|
Mouse   197 IAVFLALPHAIYQNLFTLVNMDGDTRSYCLPSFPGP---SILVSKYVDLGTFILLYILPLLVIVV 258

  Fly   274 FYVLIALHLMYSASVPGEIQGAV-----RQVRA---RRKVAVTVLAFVV-IFGICFLPYHVFFLW 329
            .|..:...|.        ||.|:     ||:.|   :||.::.:|..:| :|.:|:.|.: |::.
Mouse   259 TYSHLGKRLW--------IQNAIGDASARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLN-FYVV 314

  Fly   330 FYFWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKRG 394
            .......::|     .||....:..:.:::|.||....:::.:||                    
Mouse   315 LISSAGVEND-----SVLFYAFHWFAMSSTCYNPFIYCWLNRSFR-------------------- 354

  Fly   395 QHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCRLQET-TITTLPNGGNQNGANISAVELALP 458
                      ..|.|.:|.|.||...|..|.::..:.||: .:..|..      :::..|.||:|
Mouse   355 ----------AKLRSISSFRMQSLFVCSNSQVQQIKPQESHELRELQT------SSLLRVPLAVP 403

  Fly   459 VLQ-------APGHN 466
            ..|       |.|.|
Mouse   404 EPQVFEDPSLATGDN 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 78/306 (25%)
TM helix 1 83..109 CDD:320593 7/25 (28%)
TM helix 2 116..142 CDD:320593 8/25 (32%)
TM helix 3 154..184 CDD:320593 11/29 (38%)
TM helix 4 201..221 CDD:320593 5/19 (26%)
TM helix 5 252..277 CDD:320593 10/24 (42%)
TM helix 6 300..330 CDD:320593 9/33 (27%)
TM helix 7 345..370 CDD:320593 5/24 (21%)
Pgr15lNP_001028533.1 7tmA_GPR83 73..357 CDD:320511 78/336 (23%)
TM helix 1 74..100 CDD:320511 7/25 (28%)
TM helix 2 107..132 CDD:320511 8/24 (33%)
TM helix 3 145..175 CDD:320511 11/29 (38%)
TM helix 4 186..207 CDD:320511 6/20 (30%)
TM helix 5 237..266 CDD:320511 10/28 (36%)
TM helix 6 286..316 CDD:320511 8/30 (27%)
TM helix 7 325..350 CDD:320511 5/24 (21%)

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