DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Qrfpr

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_937835.1 Gene:Qrfpr / 229214 MGIID:2677633 Length:433 Species:Mus musculus


Alignment Length:436 Identity:106/436 - (24%)
Similarity:183/436 - (41%) Gaps:66/436 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SSENFSELVT----TETPYV-PYGRRPETYI--VP--------ILFALIFVVGVLGNGTLIVVFL 107
            ::|.||.|::    |...:: .||.||..|.  :|        :..||||.:.:.||..:|.|..
Mouse     7 TAEQFSRLLSAHNLTREQFIHRYGLRPLVYTPELPARAKLAFALAGALIFALALFGNSLVIYVVT 71

  Fly   108 SVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTL 172
            ..:.||.|.|.:|.||||:|||:....:|:.......:.|..|:|:|.:..|::..::...:.|:
Mouse    72 RSKAMRTVTNIFICSLALSDLLIAFFCIPVTMLQNISDKWLGGAFICKMVPFVQSTAVVTEILTM 136

  Fly   173 TALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAVSIWLLAILCGLPA--LIGSNLKHLGINEK 235
            |.::.:|:..::.|.:....:     .||........:||.||:.|.|.  :....:|:..:.||
Mouse   137 TCIAVERHQGLIHPFKMKWQY-----TTRRAFTILGVVWLAAIIVGSPMWHVQRLEIKYDFLYEK 196

  Fly   236 SIVICYPYPEEWGINYAKSMVLLHFLV-YYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQV 299
            ..|.|.   |||.....:.:.....|| .:.:||||:.|.|..|...|.....| |: ..|::.:
Mouse   197 EHVCCL---EEWASPMHQRIYTTFILVILFLLPLVVMLVLYSKIGYELWIKKRV-GD-SSALQTI 256

  Fly   300 ---------RARRKVAVTVLAFVVIFGICFLPYHVFFLWFYF--WPTAQDDYNAFWHVLRIVAYC 353
                     |.:::..|.::..|.:|..|:.|:||..:...:  :....||...  .::..||..
Mouse   257 HGKEMSKIARKKKRAVVMMVTVVALFAACWAPFHVVHMMVEYSNFEKEYDDVTI--KMVFAVAQT 319

  Fly   354 MSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSR 418
            :.|.||..||....|::..|:|:|...: |               :|:.|:|  .|...|...|.
Mouse   320 IGFFNSICNPFVYAFMNENFKKNFLSAV-C---------------YCIVRET--FSPGQKPGNSG 366

  Fly   419 HSCYQSTIRSCRLQETTITTLPNGGNQNGANISAVELALPVLQAPG 464
            .|..|...:..|.|...       ....|...|...:.:.:.:.||
Mouse   367 ISMMQKRAKLSRSQRPV-------AEAKGDLFSDANVDVKLCEQPG 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 81/318 (25%)
TM helix 1 83..109 CDD:320593 9/35 (26%)
TM helix 2 116..142 CDD:320593 10/25 (40%)
TM helix 3 154..184 CDD:320593 5/29 (17%)
TM helix 4 201..221 CDD:320593 6/19 (32%)
TM helix 5 252..277 CDD:320593 8/25 (32%)
TM helix 6 300..330 CDD:320593 8/29 (28%)
TM helix 7 345..370 CDD:320593 8/24 (33%)
QrfprNP_937835.1 7tmA_QRFPR 46..343 CDD:320333 79/308 (26%)
TM helix 1 47..73 CDD:320333 8/25 (32%)
TM helix 2 80..106 CDD:320333 10/25 (40%)
TM helix 3 118..148 CDD:320333 5/29 (17%)
TM helix 4 161..182 CDD:320333 6/20 (30%)
TM helix 5 211..236 CDD:320333 8/24 (33%)
TM helix 6 266..296 CDD:320333 8/29 (28%)
TM helix 7 311..336 CDD:320333 8/24 (33%)

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