DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Tacr2

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_033340.3 Gene:Tacr2 / 21337 MGIID:98477 Length:384 Species:Mus musculus


Alignment Length:455 Identity:114/455 - (25%)
Similarity:187/455 - (41%) Gaps:100/455 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TDLAMNIGLDTSGEAPTALPPMPNVTETLWDLAMVVSQSTQWPLLDTGSSENFSELVTTETPYVP 74
            ||..:..||:::....||. .||.     |.||:       |                 .|.|: 
Mouse     8 TDTNILSGLESNATGVTAF-SMPG-----WQLAL-------W-----------------ATAYL- 41

  Fly    75 YGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLAS 139
                          ||: :|.|.||.|:|.:.|:..:||.|.|.:|::||||||.:.........
Mouse    42 --------------ALV-LVAVTGNATVIWIILAHERMRTVTNYFIINLALADLCMAAFNATFNF 91

  Fly   140 TVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTL 204
            ...:...|.:||..|.........::.||::::||::.|||.|||.|.:.       |.:...|.
Mouse    92 IYASHNIWYFGSTFCYFQNLFPVTAMFVSIYSMTAIAADRYMAIVHPFQP-------RLSAPSTK 149

  Fly   205 ATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSMVLLHFLVY---YAI 266
            |....|||:|:....|....|.:.   :::.:......:|.:   |..|.::|.|.:|:   |.:
Mouse   150 AVIAVIWLVALALASPQCFYSTIT---VDQGATKCVVAWPND---NGGKMLLLYHLVVFVLIYFL 208

  Fly   267 PLVVIAVFYVLIALHLMYSASVPGEIQGA-VRQVRARRKVAVTVLAFVVIFGICFLPYHVFFLWF 330
            ||||:...|.:|.|.|...|....:..|| :|.::|::|....::..||.|.||:||||::|:  
Mouse   209 PLVVMFAAYSVIGLTLWKRAVPRHQAHGANLRHLQAKKKFVKAMVLVVVTFAICWLPYHLYFI-- 271

  Fly   331 YFWPTAQDD--YNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKR 393
              ..|.|:|  |..|...:.:..:.::.:::..||:....::..||..|.....|          
Mouse   272 --LGTFQEDIYYRKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRC---------- 324

  Fly   394 GQHDTFCMHRDTSLTSTASKRFQSRHS-CYQSTIRSCRLQETTITT-------LPN---GGNQNG 447
                  |...    |.|...|.:..|: .....:..|..:||...|       ..|   ||.|:|
Mouse   325 ------CPWG----TPTEEDRLELTHTPSISRRVNRCHTKETLFMTGDMTHSEATNGQVGGPQDG 379

  Fly   448  447
            Mouse   380  379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 35/99 (35%)
7tm_1 98..364 CDD:278431 77/271 (28%)
Tacr2NP_033340.3 7tm_4 42..>168 CDD:304433 43/133 (32%)
7tm_1 50..307 CDD:278431 78/273 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..384 5/15 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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