DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Mas1

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_032578.2 Gene:Mas1 / 17171 MGIID:96918 Length:324 Species:Mus musculus


Alignment Length:315 Identity:73/315 - (23%)
Similarity:134/315 - (42%) Gaps:68/315 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VPILFALIFVVGVLG---NGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVE 145
            :||:..:|..:..||   || :::.||..|..||....||..|::||:.::. .:.:.|..|.::
Mouse    31 IPIVHWVIMSISPLGFVENG-ILLWFLCFRMRRNPFTVYITHLSIADISLLF-CIFILSIDYALD 93

  Fly   146 Y-----WPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLA 205
            |     ..|.....|:: |:...:.|  ::.|||:|.:|..:::.|: .:..|    |....:..
Mouse    94 YELSSGHHYTIVTLSVT-FLFGYNTG--LYLLTAISVERCLSVLYPI-WYRCH----RPKHQSAF 150

  Fly   206 TAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKS--------MVLLHFLV 262
            ....:|.|:.|               :.....|:|....||   ::::|        :.:|.|||
Mouse   151 VCALLWALSCL---------------VTTMEYVMCIDSGEE---SHSRSDCRAVIIFIAILSFLV 197

  Fly   263 YYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFF 327
            :..:.||...:..|.|..:...|.|               .|:.:.::..::||.|..:|..|.:
Mouse   198 FTPLMLVSSTILVVKIRKNTWASHS---------------SKLYIVIMVTIIIFLIFAMPMRVLY 247

  Fly   328 LWFY-FWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYL 381
            |.:| :|       :||.: |..::...|..||.|||...:||..:.:|.|...|
Mouse   248 LLYYEYW-------SAFGN-LHNISLLFSTINSSANPFIYFFVGSSKKKRFRESL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 28/107 (26%)
7tm_1 98..364 CDD:278431 63/282 (22%)
Mas1NP_032578.2 7tmA_MrgprH 32..306 CDD:320238 73/314 (23%)
TM helix 1 33..59 CDD:320238 8/26 (31%)
TM helix 2 65..88 CDD:320238 5/23 (22%)
TM helix 3 106..134 CDD:320238 8/30 (27%)
TM helix 4 146..166 CDD:320238 3/34 (9%)
TM helix 5 191..216 CDD:320238 8/24 (33%)
TM helix 6 220..250 CDD:320238 9/44 (20%)
TM helix 7 258..283 CDD:320238 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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