DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Grpr

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_032203.1 Gene:Grpr / 14829 MGIID:95836 Length:384 Species:Mus musculus


Alignment Length:355 Identity:132/355 - (37%)
Similarity:209/355 - (58%) Gaps:22/355 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 YIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEY 146
            |::|.::.||.|:|::||.|||.:|.:|:.||||||.:|.||||.|||:::|..|:.::.|..:.
Mouse    42 YVIPAVYGLIIVIGLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLVTCAPVDASKYLADR 106

  Fly   147 WPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAVSIW 211
            |.:|...|.|..|::..|:|||||||||||.|||.|||.|:....:|     |.......|..||
Mouse   107 WLFGRIGCKLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASH-----ALMKICLKAALIW 166

  Fly   212 LLAILCGLPALIGSNLK--HLGINEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPLVVIAVF 274
            ::::|..:|..:.|:|.  |:....::.:.|.|||....: :.|...:..|||:|.|||.:|:|:
Mouse   167 IVSMLLAIPEAVFSDLHPFHVKDTNQTFISCAPYPHSNEL-HPKIHSMASFLVFYVIPLAIISVY 230

  Fly   275 YVLIALHLMYSA-SVPGEIQGAV---RQVRARRKVAVTVLAFVVIFGICFLPYHVFFLW--FYFW 333
            |..||.:|:.|| ::|  ::|.:   :|:.:|:::|.|||.||.:|..|:||.||.:|:  ::: 
Mouse   231 YYFIARNLIQSAYNLP--VEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHY- 292

  Fly   334 PTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC--RGASGRRKKRGQH 396
              ::.|.:....|..|.|..::|.|||.||.|||.:|.:|||.||..|.|  .|...|....|: 
Mouse   293 --SEVDTSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLMNRSHSTGR- 354

  Fly   397 DTFCMHRDTSLTSTASKRFQSRHSCYQSTI 426
            .|.||....|...:|:....:|:.|::..:
Mouse   355 STTCMTSFKSTNPSATFSLINRNICHEGYV 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 52/99 (53%)
7tm_1 98..364 CDD:278431 104/273 (38%)
GrprNP_032203.1 7tm_1 58..321 CDD:278431 104/273 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3534
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 225 1.000 Inparanoid score I3485
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153238at2759
OrthoFinder 1 1.000 - - FOG0001846
OrthoInspector 1 1.000 - - mtm8893
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4897
SonicParanoid 1 1.000 - - X1046
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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