back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CCHa1-R and Gpr37

DIOPT Version :9

Sequence 1:	NP_611241.2	Gene:	CCHa1-R / 37004	FlyBaseID:	FBgn0050106	Length:	499	Species:	Drosophila melanogaster
Sequence 2:	NP_034468.2	Gene:	Gpr37 / 14763	MGIID:	1313297	Length:	600	Species:	Mus musculus

Alignment Length:	377	Identity:	84/377 - (22%)
Similarity:	154/377 - (40%)	Gaps:	64/377 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    61 NFSELVTTETPYVP-----YGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYI 120
            |.:..|..:.|:.|     ||    .|.|..|..:||..|::||..::.:......||::.|:.:
Mouse   227 NTTRRVRLKNPFYPLTQESYG----AYAVMCLSVVIFGTGIIGNLAVMCIVCHNYYMRSISNSLL 287

  Fly   121 LSLALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVD 185
            .:||..|.|:|...:||.......:.|....|.|.:..:::..|:||:.|||.||..||:
Mouse   288 ANLAFWDFLIIFFCLPLVIFHELTKKWLLEDFSCKIVPYIEVASLGVTTFTLCALCIDRF----- 347

  Fly   186 PLRKFHAHGGGRRATRM------------TLATAVSIWLLAILCGLPALIGSNL--KHLGIN--- 233
                       |.||.:            |.|....||:.|:|..||.::...|  :.||.:
Mouse   348 -----------RAATNVQMYYEMIENCSSTTAKLAVIWVGALLLALPEVVLRQLSKEDLGFSGQA 401

  Fly   234 --EKSIVICYP-YPEE---WGINYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEI 292
              |:.::...| .|:.   ..:.|..:.:..:|..|:.:| .:..:...|:....:..|. ....
Mouse   402 PAERCVIKISPDLPDTIYVLALTYDGARLWWYFGCYFCLP-TLFTITCSLVTARKIRKAE-KAST 464

  Fly   293 QGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFLWFYFWPTAQDDYNAFWHVLRIVAYCMSFA 357
            :|..||:....::..||:|..:::|.|.:|.::..:...:..|......  ..:|.|::..:.|.
Mouse   465 RGNKRQIHLESQMNCTVVALTILYGFCIIPENICNIVTAYMATGVSQQT--MDLLNIISQFLLFF 527

  Fly   358 NSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKRGQHDTFCMHRDTSLTS 409
            .||..||.|:.:...|.:.|.....|....            |:.:.:::||
Mouse   528 KSCVTPVLLFCLCRPFSRAFMECCCCCCEE------------CIQKSSTVTS 567

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.