DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Galr2

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_034384.3 Gene:Galr2 / 14428 MGIID:1337018 Length:371 Species:Mus musculus


Alignment Length:324 Identity:112/324 - (34%)
Similarity:169/324 - (52%) Gaps:32/324 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLAST 140
            |.:||..:||:.|||||:||.:||..::.|.|...|..:..|.:||:|.:|||..|:..||..:|
Mouse    19 GWQPEAVLVPLFFALIFLVGAVGNALVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQAT 83

  Fly   141 VYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLA 205
            :||::.|.:||.||....|:..:::..|.|||.|:|.|||.||..||     |....|..|..||
Mouse    84 IYTLDDWVFGSLLCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPL-----HSRELRTPRNALA 143

  Fly   206 TAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPLVV 270
            ....||.||:|...|.|...:...|.    ::.:|:|   .|.....::|.|..|:..|.:|::|
Mouse   144 AIGLIWGLALLFSGPYLSYYSQSQLA----NLTVCHP---AWSAPRRRAMDLCTFVFSYLLPVLV 201

  Fly   271 IAVFYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFL--WFYFW 333
            :::.|.. .||.::....|  :.......||:|||...::...|:|.:|::|:|...|  ||..:
Mouse   202 LSLTYAR-TLHYLWRTVDP--VAAGSGSQRAKRKVTRMIVIVAVLFCLCWMPHHALILCVWFGRF 263

  Fly   334 PTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRG--------ASGR 389
            |..:..|     .|||:::.:|:||||.||:....||..|||.|.:  .|.|        ||||
Mouse   264 PLTRATY-----ALRILSHLVSYANSCVNPIVYALVSKHFRKGFRK--ICAGLLRRAPRRASGR 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 102/296 (34%)
TM helix 1 83..109 CDD:320593 13/25 (52%)
TM helix 2 116..142 CDD:320593 11/25 (44%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 8/19 (42%)
TM helix 5 252..277 CDD:320593 7/24 (29%)
TM helix 6 300..330 CDD:320593 11/31 (35%)
TM helix 7 345..370 CDD:320593 10/24 (42%)
Galr2NP_034384.3 7tmA_Gal2_Gal3_R 25..302 CDD:320225 102/296 (34%)
TM helix 1 26..52 CDD:320225 13/25 (52%)
TM helix 2 59..85 CDD:320225 11/25 (44%)
TM helix 3 97..127 CDD:320225 12/29 (41%)
TM helix 4 139..159 CDD:320225 8/19 (42%)
TM helix 5 183..212 CDD:320225 8/29 (28%)
TM helix 6 228..258 CDD:320225 11/29 (38%)
TM helix 7 270..295 CDD:320225 11/29 (38%)

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