DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and Galr1

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_032108.1 Gene:Galr1 / 14427 MGIID:1096364 Length:348 Species:Mus musculus


Alignment Length:345 Identity:110/345 - (31%)
Similarity:167/345 - (48%) Gaps:41/345 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVR--QMRNVPNTYILSLALADLLVIITTVPL 137
            :|...|.:|..::|.|||.:|||||..:|.|....:  :.|:..|.:||:|::|||..::..:|.
Mouse    27 FGIGVENFITLVVFGLIFAMGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPF 91

  Fly   138 ASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRM 202
            .:|||.:..|..|:|:|....:...||:.||:|||.|:|.|||.|||...|     ....|.:|.
Mouse    92 QATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRR-----SSSLRVSRN 151

  Fly   203 TLATAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGIN-YAKSMVLLHFLVYYAI 266
            .|.....||.|:|....|......|.|...|:   ..|:   |:|... :.|:.|:..|:..|.:
Mouse   152 ALLGVGFIWALSIAMASPVAYHQRLFHRDSNQ---TFCW---EQWPNKLHKKAYVVCTFVFGYLL 210

  Fly   267 PLVVIAVFYVLIALHL---MYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFL 328
            ||::|...|..:..||   :.:.|...|        .:::|.|.|||..||:|||.:||:||..|
Mouse   211 PLLLICFCYAKVLNHLHKKLKNMSKKSE--------ASKKKTAQTVLVVVVVFGISWLPHHVVHL 267

  Fly   329 WFYF--WPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC-------R 384
            |..|  :|.....:     ..||.|:|::::||..||:...|:|..|||.:.:...|       |
Mouse   268 WAEFGAFPLTPASF-----FFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHVCDESPR 327

  Fly   385 GASGRRKKR--GQHDTFCMH 402
            ..:...|.|  ....|.|.|
Mouse   328 SETKENKSRMDTPPSTNCTH 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 101/302 (33%)
TM helix 1 83..109 CDD:320593 12/25 (48%)
TM helix 2 116..142 CDD:320593 9/25 (36%)
TM helix 3 154..184 CDD:320593 14/29 (48%)
TM helix 4 201..221 CDD:320593 6/19 (32%)
TM helix 5 252..277 CDD:320593 8/24 (33%)
TM helix 6 300..330 CDD:320593 15/29 (52%)
TM helix 7 345..370 CDD:320593 9/24 (38%)
Galr1NP_032108.1 7tmA_Gal1_R 34..313 CDD:320226 101/302 (33%)
TM helix 1 35..61 CDD:320226 12/25 (48%)
TM helix 2 70..96 CDD:320226 9/25 (36%)
TM helix 3 108..138 CDD:320226 14/29 (48%)
TM helix 4 150..170 CDD:320226 6/19 (32%)
TM helix 5 196..225 CDD:320226 8/28 (29%)
TM helix 6 239..269 CDD:320226 15/29 (52%)
TM helix 7 281..306 CDD:320226 9/29 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..348 5/20 (25%)

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