DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and LOC1281799

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_061497177.1 Gene:LOC1281799 / 1281799 VectorBaseID:AGAMI1_009161 Length:472 Species:Anopheles gambiae


Alignment Length:407 Identity:121/407 - (29%)
Similarity:179/407 - (43%) Gaps:79/407 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVP--LASTVYT 143
            |.::.:.:||:|::|:|||.::::|......||:..|.:|::||.|||||....:|  |...:|.
Mosquito   104 TVLLTVAYALVFILGLLGNISVVIVVKKSTMMRSPTNRFIVNLAYADLLVNFLCLPFTLIGNLYP 168

  Fly   144 VEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAV 208
            .  |..|.|.|....:::.||:..||.||.|:|.:|.|||..|:       .|...||.......
Mosquito   169 A--WILGVFFCKGVSYLQGVSVSASVNTLMAISIERCFAISFPI-------SGTITTRQYRLIVT 224

  Fly   209 SIWLLAILCGLPALIGSNLKHLGINEKSIVIC---YPYP--EEWGINYAKSMVLLHFLVYYAIPL 268
            .||.:|:...||.|....|:.:||......||   :|.|  |.|...:|.    |.|.  |..||
Mosquito   225 IIWFIALSINLPWLFVFTLRPIGIPGSIAQICTELWPTPASESWYFLFAN----LFFC--YLGPL 283

  Fly   269 VVIAVFYVLIALHLMYSASVPGE-IQGAVRQVRARRKVAVTVLAFVVI--FGICFLPYHVFFLWF 330
            :||::.||:|..::.| .::|.| |......|..|.||.|..:.||||  |.|.:||.:..|.:.
Mosquito   284 IVISICYVIIWKNVAY-RNLPREMIINRKNDVFNRSKVKVIKMVFVVIITFAISWLPLYAIFCFV 347

  Fly   331 YFWPTAQDDYNAFWHVLRI--VAYCMSFANSCANPVALYFVSGAFRKHFNRYLF---CR------ 384
            .|......|......:|.|  ||..:..:|||.||:...|::..||..|.: ||   |.      
Mosquito   348 KFAGDLVYDETVQSFILNILPVAQWLGASNSCINPILYAFMNRKFRAGFKK-LFHSCCTTDEDDW 411

  Fly   385 ---GASGRRKKRG-------------QHDTFCMHRDTSLTSTASKRFQSRHSCYQSTIRSCRLQE 433
               ...||.:::.             ||.|. :|            :..|..|  ||:|      
Mosquito   412 DLPTTVGRLEEKDLYLRRVRSFSNGKQHQTL-LH------------YTGREHC--STLR------ 455

  Fly   434 TTITTLP----NGGNQN 446
            ..:|..|    |||..:
Mosquito   456 VPLTAPPLNVRNGGTHD 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 100/306 (33%)
TM helix 1 83..109 CDD:320593 8/25 (32%)
TM helix 2 116..142 CDD:320593 11/27 (41%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 5/19 (26%)
TM helix 5 252..277 CDD:320593 9/24 (38%)
TM helix 6 300..330 CDD:320593 13/31 (42%)
TM helix 7 345..370 CDD:320593 10/26 (38%)
LOC1281799XP_061497177.1 None

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