DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and sNPF-R

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_320180.2 Gene:sNPF-R / 1280335 VectorBaseID:AGAMI1_013226 Length:575 Species:Anopheles gambiae


Alignment Length:530 Identity:126/530 - (23%)
Similarity:227/530 - (42%) Gaps:115/530 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IANLVSMETDLAMNIGLDTSGE-APTALPP----MP----NVTETLWDLAMVVSQSTQWPLLDTG 57
            :|:||...|:|.:      :|. .|.||.|    :|    |:|.||.:|....|.:...|   .|
Mosquito    28 MASLVLDHTELPL------AGTIPPAALMPARVLLPSNATNLTLTLEELLRPNSSTVAPP---NG 83

  Fly    58 SSENFSELVTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILS 122
            .::            :.:..:....:..:|::.|||:||.||..:..|....:.|:.|.|.:|.:
Mosquito    84 DND------------IIFSNKLVQIVFCVLYSSIFVLGVFGNVLVCYVVFRNKAMQTVTNLFITN 136

  Fly   123 LALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPL 187
            |||:|:|:.:..||...:...:..|.:|..||......:..|:.:|..|||:::.||:|.|:.| 
Mosquito   137 LALSDILLCVLAVPFTPSYTFMRRWVFGKLLCHTVPLAQGCSVYISTLTLTSIAIDRFFVIIYP- 200

  Fly   188 RKFHAHGGGRRATRMTLATAVS----IWLLAILCGLPALIGSNLKHLGINE--------KSIVIC 240
              ||        .||.|:|.::    ||..||:..:|..:...|..:.:|.        .|.:.|
Mosquito   201 --FH--------PRMKLSTCITIIVLIWSFAIMVTMPYGLYMKLHGVALNGTDNATGPLSSAMYC 255

  Fly   241 YP-YPEEWGINYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSA-SVPGEIQGAVRQVRARR 303
            .. :|.|   ...|:..::..::.:.:|.:::|..|:.:::.|...| :.||.......:....|
Mosquito   256 EELWPSE---EMRKTFSIVTSILQFVLPFIIMAFCYICVSIRLNDRARTKPGSKTSRREEADRDR 317

  Fly   304 KVAVT--VLAFVVIFGICFLPYHVFFLWFYFWPTAQDDYNA------FWHVLRIVAYCMSFANSC 360
            |....  :::.|.||||.:||.:|..:.        :|:|:      |::::..:|:..:.:::|
Mosquito   318 KKRTNRMLISMVAIFGISWLPLNVVNMC--------NDFNSDINSWRFYNLIFFIAHLTAMSSTC 374

  Fly   361 ANPVALYFVSGAFRKHFNRYLFC--------------RGASG----RRKKRGQHDTFCMHRDTSL 407
            .||....:::..|||.|.:.|.|              |||.|    .|...|.:||.   ::|.:
Mosquito   375 YNPFLYAWLNDNFRKEFKQVLPCFDPSRGRAGTVGGNRGAGGGWRSERTCNGNNDTV---QETLI 436

  Fly   408 TST---ASKRFQSRHSCYQSTIRSCRLQETTITTLPNGGNQNGANISAVELALPVLQAPGHNEAH 469
            .|:   .|.|....|.         :.|:.:.::....|||...:...:...:|.|..|      
Mosquito   437 PSSQVLPSSRSSQPHQ---------QPQQLSSSSSQGQGNQPTVDSILLSEVVPPLSLP------ 486

  Fly   470 APPSYG-FLP 478
             ||..| .||
Mosquito   487 -PPLTGAMLP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 79/316 (25%)
TM helix 1 83..109 CDD:320593 9/25 (36%)
TM helix 2 116..142 CDD:320593 9/25 (36%)
TM helix 3 154..184 CDD:320593 9/29 (31%)
TM helix 4 201..221 CDD:320593 8/23 (35%)
TM helix 5 252..277 CDD:320593 4/24 (17%)
TM helix 6 300..330 CDD:320593 10/31 (32%)
TM helix 7 345..370 CDD:320593 4/24 (17%)
sNPF-RXP_320180.2 None

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