DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and LOC1270512

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_061518622.1 Gene:LOC1270512 / 1270512 VectorBaseID:AGAMI1_007575 Length:805 Species:Anopheles gambiae


Alignment Length:215 Identity:61/215 - (28%)
Similarity:106/215 - (49%) Gaps:39/215 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEYW 147
            |:| |:|:||::.|:||..:|:.....::||.|.|.|:|:||::|||:.:..:|.......:..:
Mosquito   148 IIP-LYAIIFLLSVVGNLLVILTLAQNKRMRTVTNVYLLNLAISDLLLGVFCMPFTLAGQVLRRF 211

  Fly   148 PYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPL------RKFHAHGGGRRATRMTLAT 206
            .:||.:|.|..:.:.||:.|:|:||.|:|.:|||||..||      .:|||:           ..
Mosquito   212 VFGSVMCKLIPYFQAVSVSVAVWTLVAISLERYFAICRPLSSRRWQTQFHAY-----------KM 265

  Fly   207 AVSIWLLAILCGLPALIGSNLKHLGINEKSIVI--------CYPYPEEW-GINYAKSMVLLHFLV 262
            ...:|.::.|...|         ||..::.:.:        |   .||| ...:.::.||.|.:.
Mosquito   266 IGLVWTVSFLANSP---------LGYVQRLLPVGRSTGQMKC---REEWPSPAWERAYVLFHDVG 318

  Fly   263 YYAIPLVVIAVFYVLIALHL 282
            ...:||:.:...|.:|...|
Mosquito   319 LLFLPLLTMGFAYSMIVSKL 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 61/215 (28%)
TM helix 1 83..109 CDD:320593 10/25 (40%)
TM helix 2 116..142 CDD:320593 9/25 (36%)
TM helix 3 154..184 CDD:320593 14/29 (48%)
TM helix 4 201..221 CDD:320593 2/19 (11%)
TM helix 5 252..277 CDD:320593 6/24 (25%)
TM helix 6 300..330 CDD:320593
TM helix 7 345..370 CDD:320593
LOC1270512XP_061518622.1 None
Blue background indicates that the domain is not in the aligned region.

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