DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa1-R and MRGPRF

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001091985.1 Gene:MRGPRF / 116535 HGNCID:24828 Length:343 Species:Homo sapiens


Alignment Length:322 Identity:73/322 - (22%)
Similarity:135/322 - (41%) Gaps:97/322 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYT 143
            |...::..:|.|:.:.|::||| |::.|......||..:.|.|.||.||:..:     .:..|::
Human    42 PPPAVMNYIFLLLCLCGLVGNG-LVLWFFGFSIKRNPFSIYFLHLASADVGYL-----FSKAVFS 100

  Fly   144 VEYWPYGSFLCSLSEFMKDVS--IGVSVF-----TLTALSGDRYFAIVDPLRKFHAHGGGRRATR 201
            :  ...|.||.:.:::::.|.  :|:.:|     .|.|:|.:|..:::     |.|....||..|
Human   101 I--LNTGGFLGTFADYIRSVCRVLGLCMFLTGVSLLPAVSAERCASVI-----FPAWYWRRRPKR 158

  Fly   202 MTLATAVSIWLLAIL--------C-----GLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAK 253
            ::......:|:|::|        |     |.|   |:..:|:.|                     
Human   159 LSAVVCALLWVLSLLVTCLHNYFCVFLGRGAP---GAACRHMDI--------------------- 199

  Fly   254 SMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRARR-----KVAVTVLAFV 313
            .:.:|.||:  ..||:|:..  :.:.||:               :.||||     |:...:||.|
Human   200 FLGILLFLL--CCPLMVLPC--LALILHV---------------ECRARRRQRSAKLNHVILAMV 245

  Fly   314 VIFGICFLPYHVFFLWFYFW----PTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSG 371
            .:|.:..:  ::...||.||    |....:|        :...|:.. ||.|.|: :||::|
Human   246 SVFLVSSI--YLGIDWFLFWVFQIPAPFPEY--------VTDLCICI-NSSAKPI-VYFLAG 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 27/106 (25%)
7tm_1 98..364 CDD:278431 65/294 (22%)
MRGPRFNP_001091985.1 7tmA_MrgprF 45..318 CDD:320237 72/319 (23%)
TM helix 1 46..72 CDD:320237 8/26 (31%)
TM helix 2 78..104 CDD:320237 7/32 (22%)
TM helix 3 118..146 CDD:320237 7/27 (26%)
TM helix 4 158..178 CDD:320237 4/19 (21%)
TM helix 5 202..227 CDD:320237 8/43 (19%)
TM helix 6 232..262 CDD:320237 7/31 (23%)
TM helix 7 270..295 CDD:320237 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..343
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.