DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and galr2

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_002940025.1 Gene:galr2 / 100486593 XenbaseID:XB-GENE-921716 Length:373 Species:Xenopus tropicalis


Alignment Length:307 Identity:103/307 - (33%)
Similarity:171/307 - (55%) Gaps:22/307 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYT 143
            ||:.::|:|::|||:||.:||..::.|.|...::.|..|.:||:|.:|||..||..||..:|:||
 Frog    15 PESVLIPVLYSLIFLVGTVGNSLVLAVLLRNGKVNNTTNLFILNLGVADLCFIIFCVPFQATIYT 79

  Fly   144 VEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAV 208
            ::.|.:|.|:|....|...:::..|.||||.:|.|||.||..|||....     |..:..|....
 Frog    80 LDSWVFGPFMCKAVHFFIYLTMYASSFTLTTVSLDRYLAIRYPLRSREL-----RTPKNALLAIT 139

  Fly   209 SIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGINYAKSMVLLHFLVYYAIPLVVIAV 273
            .||.|:::...|.|  |..:...::  ::.:|:|.   |..:|.::|.|..|...|.||::::::
 Frog   140 LIWSLSLVFSGPYL--SYYQEFQLS--NLTVCHPV---WQDSYRRAMDLCTFAFSYVIPVLILSL 197

  Fly   274 FYVLIALHLMYSASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFL--WFYFWPTA 336
            .|.. .:..:::|..|  |:......||:|:|...::...|:|.:|:||:|:..|  ||.::|  
 Frog   198 TYAR-TIRYLWTAVDP--IEDMSESKRAKRRVTRMIIIVAVLFCLCWLPHHLVILCVWFGYFP-- 257

  Fly   337 QDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFC 383
               .|.|.:.|||:::.:|:||||.|||....||..|||.|.:...|
 Frog   258 ---LNNFTYALRILSHLVSYANSCVNPVVYALVSKHFRKGFRKIFRC 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 99/296 (33%)
TM helix 1 83..109 CDD:320593 11/25 (44%)
TM helix 2 116..142 CDD:320593 12/25 (48%)
TM helix 3 154..184 CDD:320593 12/29 (41%)
TM helix 4 201..221 CDD:320593 4/19 (21%)
TM helix 5 252..277 CDD:320593 7/24 (29%)
TM helix 6 300..330 CDD:320593 11/31 (35%)
TM helix 7 345..370 CDD:320593 11/24 (46%)
galr2XP_002940025.1 7tmA_Gal2_Gal3_R 18..295 CDD:320225 99/296 (33%)
TM helix 1 19..45 CDD:320225 11/25 (44%)
TM helix 2 52..78 CDD:320225 12/25 (48%)
TM helix 3 90..120 CDD:320225 12/29 (41%)
TM helix 4 132..152 CDD:320225 4/19 (21%)
TM helix 5 176..205 CDD:320225 7/29 (24%)
TM helix 6 221..251 CDD:320225 11/29 (38%)
TM helix 7 263..288 CDD:320225 11/24 (46%)

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