DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and qrfprl2

DIOPT Version :10

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_002935352.5 Gene:qrfprl2 / 100486271 XenbaseID:XB-GENE-952811 Length:431 Species:Xenopus tropicalis


Alignment Length:445 Identity:110/445 - (24%)
Similarity:182/445 - (40%) Gaps:88/445 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ENFSELV----TTETPYV-PYGRRPETYI--VP--------ILFALIFVVGVLGNGTLIVVFLSV 109
            |..|:|:    .|...:: .||.:|..||  :|        :|:.:||::.:.||..::.:.:..
 Frog    10 ETLSQLLKEHNMTRLQFIAAYGLKPLVYIPELPLSAKAIFLVLYIIIFILALFGNSLVVYIIIRK 74

  Fly   110 RQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTA 174
            :.||.|.|.:|.|:|.:||||....:|..........|..|.|:|.:..|::..::..|..|:|.
 Frog    75 KAMRTVTNIFICSMACSDLLVTFFCIPFTLLQNISSEWLGGRFVCKMVPFIQTTAVVASTLTMTC 139

  Fly   175 LSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAVSIWLLAILCGLPAL----------IGSNLKH 229
            ::.:||..||.|| |........||.:|    ...:|.:||:.|.|.|          :..||.|
 Frog   140 IAVERYQGIVHPL-KMKRQYTNIRAYKM----LGCVWSVAIVVGSPMLHVQTLEVKYDLLYNLYH 199

  Fly   230 LGINEKSIVICYPYPEEWG-INYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEI- 292
                    |.|.   |.|. :...::..:...:..:.:||..:.:.|..|...|.....| |:. 
 Frog   200 --------VCCL---ESWSDVELRRAYAIFILVALFLVPLAAMLLLYTRIGYELWIKKRV-GDCS 252

  Fly   293 ------QGAVRQVRARRKVAVTVLAFVVI-FGICFLPYHVFFLWFYFWPTAQDDYNAFWHVLRIV 350
                  :..:.::..::|.||.::..||: |..|:.|:||..:.|.: ...:|:|:.. .|..||
 Frog   253 VLNTLSRNEMAKITRKKKRAVMMMVIVVLFFTACWAPFHVVHILFEY-NNLEDEYDDV-TVKMIV 315

  Fly   351 A--YCMSFANSCANPVALYFVSGAFRKHFNRYLFC-------------RGASGRRKKRGQHDTFC 400
            |  ..:.|.||..|||...|::..|:|.....|||             |.:....:.:|....|.
 Frog   316 AIVQAVGFFNSFNNPVVYTFMNENFKKSLVAILFCHFRAQEPVEPADKRDSQQSERPKGGTTMFF 380

  Fly   401 MHRDTSLTSTASKRFQSRHSCYQSTIRSC------RLQETTI-------TTLPNG 442
            ..||       .:..||..|.....:|.|      ||:....       ..||||
 Frog   381 ARRD-------GRSGQSHLSAENLELRLCEQFPAARLESVAYPLVNAHKDLLPNG 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 84/325 (26%)
TM helix 1 83..109 CDD:320593 7/35 (20%)
TM helix 2 116..142 CDD:320593 9/25 (36%)
TM helix 3 154..184 CDD:320593 7/29 (24%)
TM helix 4 201..221 CDD:320593 5/19 (26%)
TM helix 5 252..277 CDD:320593 3/24 (13%)
TM helix 6 300..330 CDD:320593 10/30 (33%)
TM helix 7 345..370 CDD:320593 11/26 (42%)
qrfprl2XP_002935352.5 7tmA_QRFPR 48..343 CDD:320333 80/313 (26%)
TM helix 1 48..74 CDD:320333 5/25 (20%)
TM helix 2 81..107 CDD:320333 9/25 (36%)
TM helix 3 119..149 CDD:320333 7/29 (24%)
TM helix 4 162..183 CDD:320333 8/24 (33%)
TM helix 5 212..237 CDD:320333 3/24 (13%)
TM helix 6 267..297 CDD:320333 10/29 (34%)
TM helix 7 312..337 CDD:320333 10/24 (42%)

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