DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and ora3

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_009294044.1 Gene:ora3 / 100004895 ZFINID:ZDB-GENE-100721-3 Length:361 Species:Danio rerio


Alignment Length:399 Identity:80/399 - (20%)
Similarity:146/399 - (36%) Gaps:123/399 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NFSELVTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLI-VVFLSVRQMRNV---PNTYIL 121
            |.|:.:|:...|:            :|:.::.::|..||.|:| ||..|:.|....   .:..::
Zfish     9 NISQRITSSPFYI------------MLYVVLVLLGNAGNTTVIAVVGQSLLQETGTVRSSDVILV 61

  Fly   122 SLALADLLVIITTVPLASTVYTVEYWPYGSFLC-SLSEFMKDVSIGV------SVFTLTALSGDR 179
            ::|.::|:|.:    |.:||..|.......||. .:.:||..:.:.|      |.|.|:|.....
Zfish    62 NMAFSNLMVSL----LRNTVLMVSDLGVEIFLSRDMCQFMMGLWVWVRSANVWSTFFLSAFHFQT 122

  Fly   180 YFAIVDPLRKFHAHGGGRRATRMTLATAVS-IWLLAILCGLPALIGS------------------ 225
            ...:..|:...|    |.|...::|..... ||.|.::..:||.|.|                  
Zfish   123 LRRVAPPVINLH----GPRGPPLSLILGFCLIWSLNLIYSIPAFIFSKNGNENSTEGSGCPGSAP 183

  Fly   226 NLKHLGINEKSIVI---------------------C-YPYPEEW-GINYAKSMVLLHFLVYYAIP 267
            |:..|..:..|:.:                     | :.:|..: |:.:|.|.::||    .:||
Zfish   184 NISRLLFSWISLTVYLWCVLQTLMLVSSTTRPLLGCIWDFPSAYSGLAFATSSMILH----ESIP 244

  Fly   268 LVVIAVFYVLIALHLMY------SASVPGEIQGAVRQVRARRKVAVTVLAFVVIFGICFLPYHVF 326
            :.::.:.. |.:|..:|      :.:..||....|.::.|.|:.|..:||..::|          
Zfish   245 ICLMNITN-LGSLCTLYAHGHKRTVASQGEDAPVVSRIPAERRAAKVILALNILF---------- 298

  Fly   327 FLWFYFWPTAQDDYNAF-------WHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCR 384
               ...|.|.....|.|       ...|.|:|..::.:....:|:.|                  
Zfish   299 ---ISSWGTNVISVNYFNYNRGQSTEFLLIIARFVNMSFIAFSPIIL------------------ 342

  Fly   385 GASGRRKKR 393
             |.|.||.|
Zfish   343 -AVGHRKLR 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 26/110 (24%)
7tm_1 98..364 CDD:278431 67/331 (20%)
ora3XP_009294044.1 TAS2R 19..>120 CDD:283059 27/116 (23%)
7tm_1 34..>210 CDD:278431 39/183 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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