DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa1-R and ackr3a

DIOPT Version :9

Sequence 1:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_005167578.1 Gene:ackr3a / 100000764 ZFINID:ZDB-GENE-070301-5 Length:403 Species:Danio rerio


Alignment Length:399 Identity:117/399 - (29%)
Similarity:178/399 - (44%) Gaps:63/399 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 METDLAMNIGLDTS--GEAPTALPPMPNVTETLWDLAMVVSQSTQ----WPLLDTGSSENFSELV 66
            |.|...:||...||  |:........||.     .|.:..|:.|:    |..|:...|.|.|..|
Zfish     1 MRTKPWINIAHSTSIKGKMTEIQSSSPNE-----KLGLSASELTEFFAMWEELNFTDSNNNSSRV 60

  Fly    67 TTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNT--YILSLALADLL 129
            ..:.....:.|......:..|:|.|||||:..|.  :||::::|..|:...|  |||:||:|||.
Zfish    61 EAQMCPASFNRSALLNAMCTLYAFIFVVGLAANA--LVVWVNMRSQRHYHETHMYILNLAVADLC 123

  Fly   130 VIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFH--A 192
            |:.|.....|::....:|.:|...|.|:..:..|::..|:|.||.:|.|||.::|    :|.  :
Zfish   124 VVATLPVWVSSLAQGGHWAFGQAACKLTHLLFSVNLFASIFFLTCMSVDRYLSVV----RFREIS 184

  Fly   193 HGGGRRATRMTLATAVSIWLLAILCGLP-----ALIGSNLKHLGINEKSIVICYP-YPE----EW 247
            |..||:..|:..|..   ||||:...:|     ..:.|...|       :.:|.| |||    :|
Zfish   185 HRRGRQVRRLVCAIT---WLLALFASVPDTYFLRSVKSQYSH-------VTLCLPVYPEDNPLQW 239

  Fly   248 GINYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQVRA-RRKVAVTVLA 311
            .:....|.|:|.|    |||..:|||.|.|:| :.:.|.|......|  .|.|: .:||   :|.
Zfish   240 MVGIQLSFVVLGF----AIPFPIIAVSYALLA-NTLASTSTHSPSNG--DQDRSVSKKV---ILM 294

  Fly   312 FVVIFGICFLPYHVFFL-----WFYFWPTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSG 371
            ::|:|..|:.|||...|     .....|......|..:..|.: ..|:|..:.|.|||...|.  
Zfish   295 YIVVFIACWAPYHAVLLADALAMLGVLPLGCSSENGLFVALHL-TQCLSLLHCCVNPVVYSFA-- 356

  Fly   372 AFRKHFNRY 380
              .:|: ||
Zfish   357 --HRHY-RY 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 37/101 (37%)
7tm_1 98..364 CDD:278431 85/285 (30%)
ackr3aXP_005167578.1 7tm_1 93..353 CDD:278431 87/286 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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