DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oxp and hpl-2

DIOPT Version :9

Sequence 1:NP_611240.1 Gene:Oxp / 37002 FlyBaseID:FBgn0034255 Length:84 Species:Drosophila melanogaster
Sequence 2:NP_001022654.1 Gene:hpl-2 / 176506 WormBaseID:WBGene00001996 Length:303 Species:Caenorhabditis elegans


Alignment Length:84 Identity:30/84 - (35%)
Similarity:47/84 - (55%) Gaps:13/84 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQKSIDLGLGVRNVK---EKSSEYIVEKFLGKRYLR-GRPQYLTKWEGYPIEQCTWEPLENLGK 61
            ||.||      .:..|   .|.:.::|||.|.||..: ||.::|.:|:|:|....:|||.||| :
 Worm     1 MSSKS------TKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENL-Q 58

  Fly    62 CMTLIADYEAELFQQSREK 80
            |:.::.::|.|.  ..|||
 Worm    59 CVEMLDEFEREF--SKREK 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OxpNP_611240.1 CHROMO 21..72 CDD:237991 20/51 (39%)
hpl-2NP_001022654.1 CD_HP1_like 18..68 CDD:349316 19/50 (38%)
CD_CSD 109..>153 CDD:391946
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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