DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oxp and CBX1

DIOPT Version :9

Sequence 1:NP_611240.1 Gene:Oxp / 37002 FlyBaseID:FBgn0034255 Length:84 Species:Drosophila melanogaster
Sequence 2:NP_001120700.1 Gene:CBX1 / 10951 HGNCID:1551 Length:185 Species:Homo sapiens


Alignment Length:69 Identity:29/69 - (42%)
Similarity:45/69 - (65%) Gaps:6/69 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VKEKSSEYIVEKFLGKRYLRGRPQYLTKWEGYPIEQCTWEPLENLGKCMTLIADYEAELFQQSRE 79
            ::|:..||:|||.|.:|.::|:.:||.||:|:..|..||||.||| .|..|||:     |.||::
Human    14 LEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENL-DCPDLIAE-----FLQSQK 72

  Fly    80 KKND 83
            ..::
Human    73 TAHE 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OxpNP_611240.1 CHROMO 21..72 CDD:237991 25/50 (50%)
CBX1NP_001120700.1 CD_HP1beta_Cbx1 20..69 CDD:349297 26/54 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..124 6/19 (32%)
CSD_HP1beta_Cbx1 112..169 CDD:349301
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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