DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oxp and cbx2

DIOPT Version :9

Sequence 1:NP_611240.1 Gene:Oxp / 37002 FlyBaseID:FBgn0034255 Length:84 Species:Drosophila melanogaster
Sequence 2:XP_002942815.2 Gene:cbx2 / 100491304 XenbaseID:XB-GENE-970247 Length:477 Species:Xenopus tropicalis


Alignment Length:60 Identity:21/60 - (35%)
Similarity:32/60 - (53%) Gaps:0/60 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YIVEKFLGKRYLRGRPQYLTKWEGYPIEQCTWEPLENLGKCMTLIADYEAELFQQSREKK 81
            :..|..|.||..:|..:||.||.|:..:..:|||.||:.....|:|..:.|..::.|.||
 Frog    12 FAAECILSKRLRKGTAEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKREQEKELRNKK 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OxpNP_611240.1 CHROMO 21..72 CDD:237991 17/49 (35%)
cbx2XP_002942815.2 CD_Cbx2 9..61 CDD:349294 17/48 (35%)
CBX7_C 436..468 CDD:407338
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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