DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and TOM1

DIOPT Version :10

Sequence 1:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_010745.3 Gene:TOM1 / 852068 SGDID:S000002865 Length:3268 Species:Saccharomyces cerevisiae


Alignment Length:352 Identity:156/352 - (44%)
Similarity:219/352 - (62%) Gaps:5/352 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 LEVSRNEIFEESYR-LIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQ 767
            :.|.|.::|.:||| |..|...:....:|.:.||||.|:|.|||.|||..:|||:|.||.|.||.
Yeast  2913 ITVRREQVFLDSYRALFFKTNDEIKNSKLEITFKGESGVDAGGVTREWYQVLSRQMFNPDYALFL 2977

  Fly   768 YSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIE 832
            ....|..|...|..||:||:|||:|.|:|..:|.|:.....||..|:...||.:|.:|::|.|:|
Yeast  2978 PVPSDKTTFHPNRTSGINPEHLSFFKFIGMIIGKAIRDQCFLDCHFSREVYKNILGRPVSLKDME 3042

  Fly   833 GVDPDLHRSLTWMLESNISGIIESTFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNY 897
            .:|||.::||.|:||::|:.|||.|||||.:.:|...|..|..||..|.|||.||::|||..|.|
Yeast  3043 SLDPDYYKSLVWILENDITDIIEETFSVETDDYGEHKVINLIEGGKDIIVTEANKQDYVKKVVEY 3107

  Fly   898 RFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHCTNETTQV 962
            :....:::|......||..||...|:..|||:||||:|.|:..|||:||:|||...:.|....:|
Yeast  3108 KLQTSVKEQMDNFLVGFYALISKDLITIFDEQELELLISGLPDIDVDDWKNNTTYVNYTATCKEV 3172

  Fly   963 LWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAH 1027
            .:||:.|.|:.:|.||:|||||||:|:|||.||:.|.|..|..   .|:||.... .::.||.:|
Yeast  3173 SYFWRAVRSFDAEERAKLLQFVTGTSKVPLNGFKELSGVNGVC---KFSIHRDFG-SSERLPSSH 3233

  Fly  1028 TCFNRIDLPPYETYQLLCDKLTQAVEE 1054
            ||||:::|||||:|:.|...|..|:.|
Yeast  3234 TCFNQLNLPPYESYETLRGSLLLAINE 3260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028
PRP40 155..>283 CDD:227435
WW 169..198 CDD:459800
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 156/352 (44%)
TOM1NP_010745.3 DUF908 92..387 CDD:428721
DUF913 448..>683 CDD:461803
MSCRAMM_ClfA <1865..2104 CDD:468110
UBM 2327..2359 CDD:464159
UBM 2367..2399 CDD:464159
HUL4 2385..3268 CDD:227354 156/352 (44%)
Blue background indicates that the domain is not in the aligned region.

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