DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and WWC2

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_011530571.1 Gene:WWC2 / 80014 HGNCID:24148 Length:1216 Species:Homo sapiens


Alignment Length:560 Identity:128/560 - (22%)
Similarity:187/560 - (33%) Gaps:158/560 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 GSGQRYASAAIAAANQAARPFLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPRIPRDFDTQHLT 556
            ||||                 |.||.|:|......|:|::....|..::|.|   |||..|:.|:
Human     6 GSGQ-----------------LPLPRGWEEARDYDGKVFYIDHNTRRTSWID---PRDRLTKPLS 50

  Fly   557 L-DAIG-PLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLS--GSILQMIRRGTVPPTSAANAGT 617
            . |.:| .||.|||........||::||.|:|||..|||..  |...:|::    ...|.|....
Human    51 FADCVGDELPWGWEAGFDPQIGVYYIDHINKTTQIEDPRKQWRGEQEKMLK----DYLSVAQDAL 111

  Fly   618 PAPPSATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLV 682
            ..............|....:....::|.....::.|:            |..|:....||..|: 
Human   112 RTQKELYHVKEQRLALALDEYVRLNDAYKEKSSSHTS------------LFSGSSSSTKYDPDI- 163

  Fly   683 GKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVA 747
                 |:.|:.|       .||.|.:           :|.....|::.|:.|   |:|.      
Human   164 -----LKAEIST-------TRLRVKK-----------LKRELSQMKQELLYK---EQGF------ 196

  Fly   748 REWLHLLSREMLNPQYGLFQYSRDDHYTLQINP-----DSGVNPDH---------LSYFHF---V 795
             |.|..:.::|...|.| ::.|.......::..     .||.....         ...||.   :
Human   197 -ETLQQIDKKMSGGQSG-YELSEAKAILTELKSIRKAISSGEKEKQDLMQSLAKLQERFHLDQNI 259

  Fly   796 GRT---LGIAVFHGH-C-----LDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNIS 851
            ||:   |..:..:.| |     ||.|..|..          .||| ||     ||     .||::
Human   260 GRSEPDLRCSPVNSHLCLSRQTLDAGSQTSI----------SGDI-GV-----RS-----RSNLA 303

  Fly   852 GIIESTFSVE--NNSFGALVVH------ELKPGGASIPVTE----ENKREYVKLYVNYRFMRGIE 904
            ..:..:...|  ..|...|.:.      |..||...|...:    ..|.|.:|           |
Human   304 EKVRLSLQYEEAKRSMANLKIELSKLDSEAWPGALDIEKEKLMLINEKEELLK-----------E 357

  Fly   905 QQFLALQKGF-CELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHC---TNETTQVLWF 965
            .||:..||.. .||......|...|.||..|.|..|.......|...|.|..   ..|||::..:
Human   358 LQFVTPQKRTQDELERLEAERQRLEEELLSVRGTPSRALAERLRLEERRKELLQKLEETTKLTTY 422

  Fly   966 WQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAV 1005
               :.|....:.|..|...:|||      ..:|..|.|::
Human   423 ---LHSQLKSLSASTLSMSSGSS------LGSLASSRGSL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 9/31 (29%)
WW 562..594 CDD:197736 15/31 (48%)
HECTc 702..1058 CDD:238033 76/346 (22%)
HECTc 726..1058 CDD:214523 72/322 (22%)
WWC2XP_011530571.1 WW 12..41 CDD:278809 9/31 (29%)
WW 59..88 CDD:278809 13/28 (46%)
DUF342 <283..385 CDD:302792 31/133 (23%)
YlqD 351..>428 CDD:287979 24/90 (27%)
C2_Kibra 700..823 CDD:176062
vWFA <1058..>1153 CDD:294047
Phage_Nu1 <1117..1192 CDD:294991
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.