DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Smurf1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_006248944.1 Gene:Smurf1 / 690516 RGDID:1594738 Length:757 Species:Rattus norvegicus


Alignment Length:1081 Identity:462/1081 - (42%)
Similarity:559/1081 - (51%) Gaps:357/1081 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RRNGTH-KVRITILCARNLARKDLFRLPDPFAKVQVDGTGQVYSTEISKSSLDPKWNAHYDLFLG 71
            ||||:. |:|:|:|||:|||:||.|||||||||:.|||:||.:||:..|::||||||.||||::|
  Rat     7 RRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVG 71

  Fly    72 IGDAITITVWNQRKIHK--GSGFLGCVRIPAFNIQSLKGAGFQRLDLGKLSPDDDELVRGQIIIS 134
            ..|:|||:|||.:||||  |:|||||||:.:..|..||..|:|||||.||:|.|.:.|||||::|
  Rat    72 KTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVS 136

  Fly   135 LLSKDGPSSGNPLAIVGPSGDVRGPSEDDSSEDSLPEGWEERRTDNGRVYYVNHATKSTQWDRPR 199
            |.::|....|      |...|.||..|::                 |.||               
  Rat   137 LQTRDRIGGG------GSVVDCRGLLENE-----------------GTVY--------------- 163

  Fly   200 QPGVVGSSHATSPQQRHNTHNGNSGDRQAPAGPTRSTTCTNLMNNGHRSRDLSVTASDERRHSTE 264
                                        ..:||.|..:|  ||                      
  Rat   164 ----------------------------EDSGPGRPLSC--LM---------------------- 176

  Fly   265 ILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGRTLEQRPTNEPATPTSSTTSASVRLHSND 329
                   |..:|.|..:.....|.......|.|...|.|.||..|           ..||     
  Rat   177 -------EEPAPYTDGTGAAAGGGNCRFVESPSQDQRLLVQRLRN-----------PEVR----- 218

  Fly   330 NHVKTPKHQTNGHAPPESTPTSPTGQQNYVNGNAQNGSTSGNGSGQAAQPQSASNGWTQEDAATT 394
            ..::||:::.:||..||                                                
  Rat   219 GSLQTPQNRPHGHQSPE------------------------------------------------ 235

  Fly   395 TSPSTTTSPPRHSQSPPTPNISPPASVTPSANGNVHSPNANSTPAGSGGGSRSYTAATPGQRSQR 459
                                                                             
  Rat   236 ----------------------------------------------------------------- 235

  Fly   460 RSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAARPFLDLPPGYEMRTT 524
                                                                   ||.|||.|||
  Rat   236 -------------------------------------------------------LPEGYEQRTT 245

  Fly   525 QQGQVYFYHIPTGVSTWHDPRIPRDF------------------------DTQHLTLDAIGPLPS 565
            .||||||.|..||||||||||||...                        |...:..|.:||||.
  Rat   246 VQGQVYFLHTQTGVSTWHDPRIPSPLGTIPGGDEAFLYEFLLQGHTSEPRDLNSVNCDELGPLPP 310

  Fly   566 GWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPAPPSATPATPSA 630
            |||.|.|.|||:|||||||||||||||||...:           ........|:.|...|:..| 
  Rat   311 GWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIM-----------NHQCQLKEPSQPLQLPSEGS- 363

  Fly   631 AAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALRTELQTM 695
               |..:..||.                                 :|.||||.||:.||.||...
  Rat   364 ---VEDEELPAQ---------------------------------RYERDLVQKLKVLRHELSLQ 392

  Fly   696 QPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLN 760
            |||:||||:||||.||||||||.|||||.||::|||||||:|||||||||||||||:||..||||
  Rat   393 QPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLN 457

  Fly   761 PQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKP 825
            |.|||||||.|:.|||||||||.:|||||||||||||.:|:||||||.::||||.|||||||.||
  Rat   458 PYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKP 522

  Fly   826 ITLGDIEGVDPDLHRSLTWMLESNISGIIESTFSVENNSFGALVVHELKPGGASIPVTEENKREY 890
            |.|.|:|.|||:||:||.|:||::|:.:::.||.||:|:||.::.|||||.|.::|||||||:||
  Rat   523 IQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEY 587

  Fly   891 VKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHC 955
            |:||||:|||||||.|||||||||.||||.|||:|||::||||:|||:..||:|||::|||||||
  Rat   588 VRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHC 652

  Fly   956 TNETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPT 1020
            ..::..|.||||.||::..|.|||||||||||:|||||||:||||||||.||||||||| .|..|
  Rat   653 VADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHL-IDANT 716

  Fly  1021 QNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGFAVE 1061
            .|||||||||||||:||||:|:.|.:||..|||||||||||
  Rat   717 DNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028 76/122 (62%)
WW 169..198 CDD:278809 3/28 (11%)
WW 514..546 CDD:197736 24/31 (77%)
WW 562..594 CDD:197736 26/31 (84%)
HECTc 702..1058 CDD:238033 259/355 (73%)
HECTc 726..1058 CDD:214523 239/331 (72%)
Smurf1XP_006248944.1 C2_Smurf-like 14..138 CDD:176028 77/123 (63%)
WW 236..267 CDD:197736 24/30 (80%)
WW 307..339 CDD:197736 26/31 (84%)
HECTc 399..754 CDD:238033 259/355 (73%)
HECTc 423..754 CDD:214523 239/331 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 477 1.000 Domainoid score I405
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 705 1.000 Inparanoid score I632
OMA 1 1.010 - - QHG46051
OrthoDB 1 1.010 - - D103319at33208
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 1 1.000 - - otm45705
orthoMCL 1 0.900 - - OOG6_100256
Panther 1 1.100 - - LDO PTHR11254
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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