DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and hectd2

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_009304826.1 Gene:hectd2 / 562999 ZFINID:ZDB-GENE-100405-3 Length:756 Species:Danio rerio


Alignment Length:623 Identity:170/623 - (27%)
Similarity:261/623 - (41%) Gaps:135/623 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   538 VSTWHDPRIPRDFDTQHLTLDA-IGPLPSGWEQRKTASG-RVYFVDHNNRTTQFTDPRLSGSILQ 600
            |:..:|..:....|||...|.. |..|...|:..:|... |.|||...|  .|:|.|........
Zfish   170 VNIVYDALLHTPADTQKSVLKGIINSLLREWKGPRTKDDLRAYFVLVQN--PQYTSPATYVIYAH 232

  Fly   601 MIRRGTVPPTSAANAGT---------------------------------PAPPSATPATPSAAA 632
            ::|:      .||.|..                                 ||.|...|.....:.
Zfish   233 LLRQ------IAALAEADHHFLMHWFKKLPQKRFKQLVERLQLFITTRLFPAKPEELPPMAKCSW 291

  Fly   633 AVPPQATPASNATPTTLTTTTNPPHRIVP--DLPQGLLEGADLLPKY------------------ 677
            .: |.||...:......:.::.|   |:|  |.....|:..|.:..|                  
Zfish   292 WI-PSATKVLSLLNAANSISSAP---IIPFTDFYNLTLDHIDFMEDYHTWQVHGNSNRFTFCQFP 352

  Fly   678 ------------------------RRDLVGKL-RALRTELQTMQPQSGHCRLEVSRNEIFEESYR 717
                                    |:.||.|: |..|.::..:     ...::|.|.::..:|..
Zfish   353 FILSTVVKKAIIQRDSEQQMISMARQTLVDKVSRRQRVDMSLL-----FLNIKVRRLQLVSDSLD 412

  Fly   718 LIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDS 782
            .:.:.|| |::|:|.|.|.||.|||.||:.:||..||.|::.:..||:|.|.::.    |....|
Zfish   413 ELSRKRA-DLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHTDYGMFTYVKES----QCYWFS 472

  Fly   783 GVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPI--------------TLGDIEG 833
            ....|:.|.|..||..:|:||::...||..|....||:||..||              ||.|::.
Zfish   473 SWKCDNYSEFRLVGALMGLAVYNSITLDIRFPPCVYKKLLTPPIVPCDLDTPVGMATLTLDDLQQ 537

  Fly   834 VDPDLHRSLTWML--ESNISGIIESTFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVN 896
            :.|||...|..:|  |.|:.....:||.|.....|.:..:.|||||..||||..|::|||:||::
Zfish   538 IMPDLAHGLGELLSYEGNVEEDFYTTFQVFQEELGVVKAYNLKPGGDKIPVTNLNRKEYVQLYID 602

  Fly   897 YRFMRGIEQQFLALQKGFCELIPSH---LLRPFDERELELVIGGISSIDVNDWRNNTRLKHCTNE 958
            :...:.|.:||.|...||..:..|:   ||||   .|:|:::.|..::|:...:...:.:..:..
Zfish   603 FLLNKSIYRQFAAFYHGFHSVCASNALMLLRP---EEVEILVCGSPNLDMGSLQRVVQYEGYSKT 664

  Fly   959 TTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNL 1023
            ...:..||.||.::..|::.:||.|.|||.|||:.|...|......:           ||.|..|
Zfish   665 DPTIRAFWDVVLAFPLELQKKLLHFTTGSDRVPVGGMADLNFKISKI-----------DVSTDWL 718

  Fly  1024 PKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGFAVE 1061
            |.:|||||:|.||||::.:.|..|||.|:....||.:|
Zfish   719 PVSHTCFNQICLPPYKSKKELRQKLTIAISNAEGFGLE 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 2/7 (29%)
WW 562..594 CDD:197736 11/32 (34%)
HECTc 702..1058 CDD:238033 125/374 (33%)
HECTc 726..1058 CDD:214523 120/350 (34%)
hectd2XP_009304826.1 HECTc 397..754 CDD:238033 126/375 (34%)
HECTc 420..753 CDD:214523 120/350 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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