DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and yap1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001132952.1 Gene:yap1 / 561411 ZFINID:ZDB-GENE-030131-9710 Length:442 Species:Danio rerio


Alignment Length:517 Identity:117/517 - (22%)
Similarity:169/517 - (32%) Gaps:175/517 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 SPSTTTSPPRHSQ----------SPPTP-NISPPASVTPSANGNV--HSPNANSTPAG------S 441
            :|..|..||....          :||.| :.|..||......|.|  |...|:|:||.      |
Zfish    34 NPKNTIVPPSVPMRLRKLPDSFFTPPEPKSHSRQASTDAGTAGTVTPHHVRAHSSPASLQLGAVS 98

  Fly   442 GGGSRSYTAATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAAN 506
            .|...|...|....:..|:||.:..::                                      
Zfish    99 PGALTSMGPANAPPQHLRQSSYEIPDD-------------------------------------- 125

  Fly   507 QAARPFLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPR------------IPRDFDTQHLTLDA 559
                  :.||||:||..|..||.||.:.....:||.|||            .|.....|::...|
Zfish   126 ------MPLPPGWEMAKTPSGQRYFLNHNDQTTTWQDPRKALLQMNQAAPASPVPVQQQNIMNPA 184

  Fly   560 IGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPAPPSAT 624
            .||||.||||..|:.|.:|:::|.|:||.:.||||........:|  :..::....|:..|.|  
Zfish   185 SGPLPDGWEQAITSEGEIYYINHKNKTTSWLDPRLDPRFAMNQQR--ISQSAPVKQGSQLPSS-- 245

  Fly   625 PATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALR 689
                       ||:...|...|..|........|:  .:.|      :||.:..::|     |||
Zfish   246 -----------PQSGVMSGNNPIRLQQIHIEKERL--RIKQ------ELLRQRPQEL-----ALR 286

  Fly   690 TELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLL 754
            .:|.|...|.|..:..||                              ..|:  |..||......
Zfish   287 NQLPTSMEQDGGTQNPVS------------------------------SPGM--GQDARNMTTNS 319

  Fly   755 SREMLNPQYGLFQYSRDD---------HYTLQINPDSGVN-----------------------PD 787
            |...||.  |.: :|||:         .|::...||..:|                       ||
Zfish   320 SDPFLNS--GTY-HSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMETGDTLGPGSMATQPSRFPD 381

  Fly   788 HLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGV----DPDLHRSLTWM 845
            :|.........||........::|....|..::.|:..| |.|:|.|    ..|....|||:
Zfish   382 YLDAIPGTDVDLGTLEGESMAVEGEELMPSLQEALSSDI-LNDMESVLAATKIDKENFLTWL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 16/43 (37%)
WW 562..594 CDD:197736 16/31 (52%)
HECTc 702..1058 CDD:238033 34/180 (19%)
HECTc 726..1058 CDD:214523 32/156 (21%)
yap1NP_001132952.1 FAM181 <41..186 CDD:291891 41/188 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..89 11/37 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..116 4/18 (22%)
WW 127..158 CDD:197736 14/30 (47%)
WW 188..217 CDD:278809 13/28 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..254 6/36 (17%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:P46937 247..442 49/243 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..374 22/122 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.