DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and herc5.1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_017211386.1 Gene:herc5.1 / 559981 ZFINID:ZDB-GENE-090311-56 Length:884 Species:Danio rerio


Alignment Length:441 Identity:108/441 - (24%)
Similarity:185/441 - (41%) Gaps:78/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   676 KYRRDLVGKLRALRTELQTMQPQ----------SGHCR-LEVSRNEIFEESYR------LIMKMR 723
            |.|..::.::..|...||||...          :|... ||..|| .:||::|      .|..:.
Zfish   461 KKRYFIIHEVNNLLDVLQTMNADVNNNWPWFNLTGQIHALEAQRN-AYEETFRKLTSFPCIFNLE 524

  Fly   724 AK--DMRKRLMVKFKGEEGLDYGGVA------------------REWLHLL-------------- 754
            ||  .||.|:   :||...|.....|                  .:||.:|              
Zfish   525 AKCSYMRNRV---WKGRFELTVRRTALLEDCLCLLNPGTQQHLRDKWLSILFTENVSKRTDVHKR 586

  Fly   755 ------SREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGF 813
                  .:|:.:|...||.|  :|:.|:...| :.:..:...||.| |...|:|..:...::..|
Zfish   587 DFFLNVFKELCDPASQLFMY--NDNETMIWFP-AKLTVEKKKYFLF-GILCGLAFNNSSVVNLPF 647

  Fly   814 TTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIESTFSVENNSFGALVVHELKPGGA 878
            ....:|:|||...:|.|....:|...|||.::||.:...:.||:..:.....|:.:  :|.|...
Zfish   648 PLALFKKLLNIKPSLEDFIEFNPVHGRSLQYILEYSNDVLEESSLPLTIIWSGSEL--DLDPAEP 710

  Fly   879 SIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDV 943
            ...:|..|:.::|..||::.|.:.:::.|...::||.......|:..|:..||..|:.|....|.
Zfish   711 EQHITTSNRTKFVDEYVDHIFNQSVKEAFEEFRRGFFRGCEKRLVEMFEPEELRGVLVGNEEYDW 775

  Fly   944 NDWRNNTRLKHCTN-ETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGP 1007
            |..:.||..:...| :...::.||:|.:..:...:...|.|:||..|||:.|..|:         
Zfish   776 NILKQNTTYEGVFNADHPVIISFWEVFDDLTPNEKKSFLLFLTGFERVPILGMSAV--------- 831

  Fly  1008 RLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGF 1058
            ::...|| |:....:||:..||.:.:.||.||..:.|..|:.:|:....||
Zfish   832 KMRVTHL-ANSTEDHLPETLTCHSLLQLPKYEKRETLRAKVIEAISHKRGF 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 98/403 (24%)
HECTc 726..1058 CDD:214523 88/370 (24%)
herc5.1XP_017211386.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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