DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and LOC556872

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_021334149.1 Gene:LOC556872 / 556872 -ID:- Length:1472 Species:Danio rerio


Alignment Length:736 Identity:147/736 - (19%)
Similarity:241/736 - (32%) Gaps:218/736 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 AGFQRLDLGKLSPDDDELVRGQIIISLLSKDGPSSGNPLAIVGPSGDVRGPSEDDSSEDSLPEGW 173
            ||...:.:...||.....:||              ||..|:....|..||.....|      |.|
Zfish   243 AGASSVPVHTSSPSQSRNLRG--------------GNTSALENGLGPRRGARVRGS------ENW 287

  Fly   174 EERRTDNGRVYYVNHATK--STQW--------DRPRQPGVVGSSHA------------------- 209
            |...:|:|..||.:|..|  |:.|        |....|..:  ||:                   
Zfish   288 EMMYSDSGNAYYKDHHLKPSSSSWLNRRAHSRDNVCMPEYI--SHSCIWQSLTDLQSQCVQVAEF 350

  Fly   210 ---TSPQQRHNTHN--------------GNSGDRQ-------APAGPTRSTTCTNL--MNN---- 244
               .|..:..:.|.              |.|..|:       .|.||:...|...|  :|:    
Zfish   351 TDQPSELRGFSVHTRLVKGARGFGFNIVGGSRRREFLQIYSITPGGPSTLNTADILVYINDTCVL 415

  Fly   245 GHRSRD-LSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGRTLEQRPT 308
            |:..:| :.:..:....|:.:|:...|......:......:.| :.|:|.|          |.|.
Zfish   416 GYSHKDVVEMLKAIPIGHTVDIMVRRGYPMLYNSEGCPKMSNP-RLTASQN----------QSPH 469

  Fly   309 NEPATPTSSTTSASV---RLHSNDN---------------HVKTPKH--QTNGHAPPESTPTSPT 353
            ..|.|.|.....|.:   :||.|.|               .|:..:.  ..||::||.::|..|.
Zfish   470 LPPPTTTQPQAQAPLPYAQLHLNHNSPPWADFDRGSSRNLRVRASRFSLDANGNSPPFASPPRPP 534

  Fly   354 GQQNYVNGNAQNGSTSGNGSGQAAQPQSA--------SNGWTQEDAATTT--------------S 396
                    ::..|| :|.|||....|::|        :...:|.|:...:              :
Zfish   535 --------SSYQGS-NGYGSGFLRPPRTARSIRRLQSAELASQSDSEVVSAIGSHRASFIRNHNN 590

  Fly   397 PSTTTSPP------RHSQSPPTPNISPPASVTPSANGNVHSPNANSTP---AGSGGGSRSYTAAT 452
            .|.:|.||      :.|:|..:.:..||.|..|       .|:...:|   :.|.||.|.|:...
Zfish   591 NSLSTPPPLRLHSFKSSESDLSSSTPPPISRLP-------LPHTELSPGPVSFSPGGGRRYSHLR 648

  Fly   453 PGQRS-----------------QRRSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSGQRYASA 500
            ..|.|                 ...:|...|..:|:  ..|.|..:.....|.||..:|......
Zfish   649 KPQNSMLTPPSSVHSDGPYFTFNGTASASSGSPNSS--IPSPGALSAVIGSGVGGMAAGGELVPV 711

  Fly   501 AIAAANQAAR-PFLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPRIPRDFDTQHLTLDAIGPLP 564
            |:|...:.:. .|.....|:..|.|...:|:.:....|:.:..........|.|.|:...:..: 
Zfish   712 ALAKCERGSNMGFSVTAGGHGGRQTLVKKVWDHRQCNGLQSGDAVVKINGADVQSLSFAQVQRI- 775

  Fly   565 SGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGT-VPPTSAANAGTP-------APP 621
               .|..|..|.|..:.:...:.....|       ..:||.| .||.||:::..|       :..
Zfish   776 ---LQEHTKKGEVILLVYRGPSNYSNSP-------SSVRRLTPPPPRSASDSEVPFTDSMPLSRN 830

  Fly   622 SATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGAD----LLPKYR---R 679
            |.||.:|:...:...|:|...::.|.|||..           |:..:...|    |.|:.:   :
Zfish   831 SLTPPSPALVRSSLVQSTSFLDSVPVTLTLE-----------PRDWMSSEDGGTVLSPRVKTEEK 884

  Fly   680 DLVGKLRALRTELQTMQPQSG 700
            :....||....||: .:|..|
Zfish   885 EQPPALRGYEVELK-RKPGEG 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028 6/25 (24%)
WW 169..198 CDD:278809 12/38 (32%)
WW 514..546 CDD:197736 5/31 (16%)
WW 562..594 CDD:197736 5/31 (16%)
HECTc 702..1058 CDD:238033
HECTc 726..1058 CDD:214523
LOC556872XP_021334149.1 PDZ_signaling 24..88 CDD:238492
NK 111..>190 CDD:327404
PDZ_signaling 365..440 CDD:238492 13/74 (18%)
PDZ 722..791 CDD:238080 13/72 (18%)
PDZ_signaling 893..980 CDD:238492 4/13 (31%)
PDZ_signaling 1017..1093 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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