DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and Magix

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_061302.2 Gene:Magix / 54634 MGIID:1859644 Length:324 Species:Mus musculus


Alignment Length:319 Identity:69/319 - (21%)
Similarity:97/319 - (30%) Gaps:99/319 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GNAQNGSTSGNGSGQA--------AQPQSASNGWTQEDAATTTSPSTTTSPPRHSQSP---PTPN 414
            |..:.|...|:.|.:|        |:|.:|.   ...|.......:..|...||::..   .:.:
Mouse    13 GGRRGGGLQGSRSPRARQLLERLDARPLAAR---AAADLTALVRKAGATLRLRHTEGVSGLDSAD 74

  Fly   415 ISPPASVTPSANGNVHSPNANSTPAGSGGGSRSYTAAT---PGQRSQRRSSRQQGEESSTRRRS- 475
            |....|..|.|....|.|.          ..||.|..|   |...:|.::|.......:|.|.| 
Mouse    75 IEVTDSRLPHATLVKHRPQ----------HQRSETLGTWTEPLPVTQNKASYALKVPQATGRFSV 129

  Fly   476 --SRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAARPFLDLPPGYEMRTTQQGQVYFY------ 532
              :||....|.:..||...||.         |.......|...|.......|.|.:..|      
Mouse   130 ELTRGPAGFGLTLSGGRNVSGD---------APLTVHGLLKDGPAQRCGRLQAGDLVLYINGQST 185

  Fly   533 ----------HIPTGVSTWHDPRI------PRDFDTQHL--------TLDAIGPLPSGWEQRKTA 573
                      .|.||     .|.:      |:|.|...:        |..::.|..|..|.|.|.
Mouse   186 QGLTHAQVVERIRTG-----GPHLCLVLQRPQDMDGSRIKEVGGHRKTDRSLDPRGSRVESRSTI 245

  Fly   574 SGRVYFVDHNNRTTQFTDPRLS------GSILQMIRRGT------VPPTSAANAGTPAP 620
            |.    |.|..:|.  |.||.|      |.:::.:...|      :|       |||.|
Mouse   246 SP----VHHRPKTR--TSPRPSPEAVAIGHVVRAVEHPTEDLENRIP-------GTPGP 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 8/47 (17%)
WW 562..594 CDD:197736 11/31 (35%)
HECTc 702..1058 CDD:238033
HECTc 726..1058 CDD:214523
MagixNP_061302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/12 (25%)
PDZ 126..211 CDD:214570 19/98 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..263 14/52 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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