DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Wwc2

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_598552.2 Gene:Wwc2 / 52357 MGIID:1261872 Length:1187 Species:Mus musculus


Alignment Length:553 Identity:121/553 - (21%)
Similarity:192/553 - (34%) Gaps:144/553 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 GSGQRYASAAIAAANQAARPFLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPRIPRDFDTQHLT 556
            ||||                 |.||.|:|......|:|::....|..::|.|   |||..|:.|:
Mouse     6 GSGQ-----------------LPLPRGWEEARDYDGKVFYIDHNTRRTSWID---PRDRLTKPLS 50

  Fly   557 L-DAIG-PLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLS--GSILQMIRRGTVPPTSAANAGT 617
            . |.:| .||.|||.........|::||.|:|||..|||..  |...:|::    ...|.|....
Mouse    51 FADCVGDELPWGWEAGFDPQIGAYYIDHINKTTQIEDPRKQWRGEQEKMLK----DYLSVAQDAL 111

  Fly   618 PAPPSATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLV 682
            ..............|....:....::|.....::.|:            |..|:....||..|: 
Mouse   112 RTQKELYHVKEQRLALALDEYVRLNDAYKEKSSSHTS------------LFSGSSSSTKYDPDI- 163

  Fly   683 GKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKG---------- 737
                 |:.|:.|.|     .|::..:.|:......|:.|.:..:..:::..|..|          
Mouse   164 -----LKAEISTTQ-----LRVKKLKRELSHMKQELLYKQQGFETLQQIDEKMSGGQSGYELNEA 218

  Fly   738 ----------EEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYF 792
                      .:.:..|...::.| :.|...|..::.|.|........|:.:|   || .|||  
Mouse   219 KAILTELKSIRKAISSGEKEKQDL-MQSLAKLQERFHLDQNMGSSEPDLRSSP---VN-SHLS-- 276

  Fly   793 HFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIEST 857
                       .....||.|..|..          .||| ||     ||     .||::..:..:
Mouse   277 -----------LSRQTLDAGSQTSI----------SGDI-GV-----RS-----RSNLAEKVRLS 309

  Fly   858 FSVE--NNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIP- 919
            ...|  ..|...|.:...|..|.:.|...:.::|.:.| :|.:.....|.||:..||...|.:. 
Mouse   310 LQYEEAKRSMANLKIELSKLDGEAWPGALDIEKEKLML-INEKEELLKELQFITPQKRSQEELER 373

  Fly   920 -----SHLLRPFDERELELVIGGIS-----SIDVNDWRNN--TRLKHCTNETTQVLWFWQVVESY 972
                 .||     |.||....|..|     .:.:.:.|..  .:|:..|..||.:   :..::|.
Mouse   374 LEAERQHL-----EEELMAARGSPSRALTERLKLEEKRKELLQKLEETTKLTTSL---YSQLQSL 430

  Fly   973 SSEMRARLLQFVTGSSRVPLQGFRALQGSTGAV 1005
            ||.    .|...:|||      ..:|..|.|::
Mouse   431 SSS----TLSMSSGSS------LGSLASSRGSL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 9/31 (29%)
WW 562..594 CDD:197736 14/31 (45%)
HECTc 702..1058 CDD:238033 69/339 (20%)
HECTc 726..1058 CDD:214523 65/315 (21%)
Wwc2NP_598552.2 WW 12..41 CDD:278809 9/31 (29%)
WW 59..88 CDD:278809 12/28 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 438..464 6/22 (27%)
C2_Kibra 699..822 CDD:176062
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 830..849
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 874..963
Phage_Nu1 <1088..>1146 CDD:294991
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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