DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and NEDD4

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001271267.1 Gene:NEDD4 / 4734 HGNCID:7727 Length:1319 Species:Homo sapiens


Alignment Length:1038 Identity:323/1038 - (31%)
Similarity:448/1038 - (43%) Gaps:314/1038 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FLGCVRIPAFNI--------------------QSLKG--AGFQRLDLGKL-----SPDD-----D 124
            |||.|.:|.:.:                    :|.|.  .|:.||.:..|     |.||     :
Human   521 FLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPKTSGSEDDNAEQAE 585

  Fly   125 ELVRGQIIISLLSKDGPSSGNPLAIVGPSGDVRGPSEDDSSEDSLPEGWEERRTDNGRVYYVNHA 189
            ||..|.:::     |.|.:...|             :.......||.|||||:...||.|||||.
Human   586 ELEPGWVVL-----DQPDAACHL-------------QQQQEPSPLPPGWEERQDILGRTYYVNHE 632

  Fly   190 TKSTQWDRPRQPGVVGSSHATSPQQR-HNTHNGNSGDRQAPAGPTRSTTC--TNLMNNGHRSRDL 251
            ::.|||.||            :||.. .:..|||...:...|..||....  |..::|...|.:.
Human   633 SRRTQWKRP------------TPQDNLTDAENGNIQLQAQRAFTTRRQISEETESVDNRESSENW 685

  Fly   252 SVTASDERRHSTEILSSVGKENTSPTTPVSA--------------------TTTPGKKTSSSNSS 296
            .:...||        :::......|:.|.|:                    .:...:..||||.|
Human   686 EIIREDE--------ATMYSNQAFPSPPPSSNLDVPTHLAEELNARLTIFGNSAVSQPASSSNHS 742

  Fly   297 SAGGR----TLEQRPTNEPATPTSSTTSASVRLHSNDNHVKTPKHQTNGHAPPESTPTSPTGQQN 357
            |..|.    |.|::||.....||||                       |..|.........|:..
Human   743 SRRGSLQAYTFEEQPTLPVLLPTSS-----------------------GLPPGWEEKQDERGRSY 784

  Fly   358 YVNGNAQNGSTSGNGSGQAAQPQSASNGWTQEDAATTTSPSTTTSPPRHSQSPPTPNISPPASVT 422
            ||:.|                  |.:..||:.....|...|..||    |||             
Human   785 YVDHN------------------SRTTTWTKPTVQATVETSQLTS----SQS------------- 814

  Fly   423 PSANGNVHSPNANSTPAGSGGGSRSYTAATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGTSGG 487
                              |.|.....:.:..||:..:.|..:||                     
Human   815 ------------------SAGPQSQASTSDSGQQVTQPSEIEQG--------------------- 840

  Fly   488 GGGGGSGQRYASAAIAAANQAARPFLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPR--IPRDF 550
                                      .||.|:|:|....|:.:|....|..:||.|||  ||   
Human   841 --------------------------FLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIP--- 876

  Fly   551 DTQHL-------TLDAIGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVP 608
              .||       |.:.:||||.|||:|....||:::::||.:.||:.||||.             
Human   877 --AHLRGKTSLDTSNDLGPLPPGWEERTHTDGRIFYINHNIKRTQWEDPRLE------------- 926

  Fly   609 PTSAANAGTPAPPSATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADL 673
                 |.....|            |||                                      
Human   927 -----NVAITGP------------AVP-------------------------------------- 936

  Fly   674 LPKYRRDLVGKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKD-MRKRLMVKFKG 737
               |.||...|....|.:|:..........:::.|..:.|:|||.||.::..| ::.||.::|.|
Human   937 ---YSRDYKRKYEFFRRKLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDG 998

  Fly   738 EEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGV-NPDHLSYFHFVGRTLGI 801
            |:|||||||||||..|:|:||.||.||||:||..|:|||||||:||: |.||||||.|:||..|:
Human   999 EKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGM 1063

  Fly   802 AVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIESTFSVENNSFG 866
            ||:||..|||.|..||||.:|:|||||.|:|.||.:.:.||.|:||::.:. ::..|.::...||
Human  1064 AVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVDSEYYNSLRWILENDPTE-LDLRFIIDEELFG 1127

  Fly   867 ALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDEREL 931
            ....||||.||:.|.||.:||:||:.|.:.:||:..|::|..|.::||.||||..|::.|||.||
Human  1128 QTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENEL 1192

  Fly   932 ELVIGGISSIDVNDWRNNTRLKHCTNETTQVL-WFWQVVESYSSEMRARLLQFVTGSSRVPLQGF 995
            ||::.|:..:||||||.:|:.|:..:...||: |||:.|....||.|.||||||||:||||:.||
Human  1193 ELLMCGLGDVDVNDWREHTKYKNGYSANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGF 1257

  Fly   996 RALQGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGF 1058
            ..|.||.   ||:.||:....  ..:.||:|||||||:||||||:::.|.|||..|:|.|.||
Human  1258 AELYGSN---GPQSFTVEQWG--TPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENTQGF 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028 17/74 (23%)
WW 169..198 CDD:278809 17/28 (61%)
WW 514..546 CDD:197736 13/33 (39%)
WW 562..594 CDD:197736 15/31 (48%)
HECTc 702..1058 CDD:238033 181/358 (51%)
HECTc 726..1058 CDD:214523 174/334 (52%)
NEDD4NP_001271267.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..229
C2 <517..570 CDD:417471 10/48 (21%)
Mediates interaction with TNIK. /evidence=ECO:0000250 578..981 134/639 (21%)
WW 611..643 CDD:197736 19/43 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 755..780 8/47 (17%)
WW 769..798 CDD:395320 8/46 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 796..834 12/72 (17%)
WW 842..871 CDD:395320 10/28 (36%)
WW 893..925 CDD:197736 15/31 (48%)
HECTc 986..1315 CDD:214523 174/334 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.740

Return to query results.
Submit another query.